RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 CACUL1Q86Y37 369 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 FAM71BQ8TC56 605 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 TSC1Q92574 1164 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 NELL1Q92832 810 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 MRGPRX1Q96LB2 322 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 GOLPH3Q9H4A6 298 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 LRRC19Q9H756 370 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SP110Q9HB58 689 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 K7ERQ8 282 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 DCLK1O15075 740 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 MAP3K13O43283 966 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 ZMPSTE24O75844 475 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 IL4RP24394 825 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 PAPOLAP51003 745 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 ARSEP51690 589 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 COPAP53621 1224 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 NHLH1Q02575 133 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 ELAVL3Q14576 367 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 C9orf64Q5T6V5 341 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 PRR23BQ6ZRT6 265 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 Q6ZVU0 165 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 RNF10Q8N5U6 811 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 GANCQ8TET4 914 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 GAB3Q8WWW8 586 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 RAPGEF5Q92565 580 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 PTPRN2Q92932 1015 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 CEP44Q9C0F1 390 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 MKRN2Q9H000 416 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 SLC6A17Q9H1V8 727 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 MTG2Q9H4K7 406 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 NOL6Q9H6R4 1146 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 CD248Q9HCU0 757 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 AMFRQ9UKV5 643 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 GUCA1BQ9UMX6 200 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 SCML1Q9UN30 329 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 CKAP5Q14008 2032 aa12.33□□□□□ -0.44
CSNK1E-213ENST00000495232 MYO15AQ9UKN7 3530 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ZNF487B1APH4 448 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 SMAD6O43541 496 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 LILRB5O75023 590 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 PALMO75781 387 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ADH1BP00325 375 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 IL1BP01584 269 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 VAV1P15498 845 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ZFXP17010 805 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 CETN2P41208 172 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 NBL1P41271 181 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 INO80DQ53TQ3 878 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 FAM46CQ5VWP2 391 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 C22orf39Q6P5X5 142 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 VSIG1Q86XK7 387 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 MMAAQ8IVH4 418 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RCOR2Q8IZ40 523 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 STK40Q8N2I9 435 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RYBPQ8N488 228 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ATPAF2Q8N5M1 289 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 PCDH20Q8N6Y1 951 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 NPWQ8N729 165 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 UBL4BQ8N7F7 174 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 PCDH19Q8TAB3 1148 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 NSMCE1Q8WV22 266 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ISG20Q96AZ6 181 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RNF157Q96PX1 679 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 RSPH9Q9H1X1 276 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 TNKS2Q9H2K2 1166 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 ETNK2Q9NVF9 386 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 UBA2Q9UBT2 640 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 CYP8B1Q9UNU6 501 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 NCKAP1Q9Y2A7 1128 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 CHD5Q8TDI0 1954 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 DMDP11532 3685 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 NUP205Q92621 2012 aa12.32□□□□□ -0.44
CSNK1E-213ENST00000495232 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
CSNK1E-213ENST00000495232 CCDC66A2RUB6 948 aa12.31□□□□□ -0.44
CSNK1E-213ENST00000495232 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
CSNK1E-213ENST00000495232 C1QTNF3-AMACRE9PGA6 284 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms