RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 MAGEA6P43360 314 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 RAD23AP54725 363 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 NME5P56597 212 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 RPS6P62753 249 aaKnown RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CLDN10P78369 228 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 BFSP2Q13515 415 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 STILQ15468 1287 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 NXNQ6DKJ4 435 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 DENND1BQ6P3S1 775 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 MMAAQ8IVH4 418 aaKnown RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 IL31RAQ8NI17 732 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ZNF347Q96SE7 839 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 HOXD1Q9GZZ0 328 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 AKIP1Q9NQ31 210 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ZDHHC2Q9UIJ5 367 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TMEM233B4DJY2 109 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CPNE6O95741 557 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TRUB2O95900 331 aaKnown RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CHRNB1P11230 501 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 KRT3P12035 628 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 IL1R1P14778 569 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TFE3P19532 575 aaPredicted RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 PROZP22891 400 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CACNB3P54284 484 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ACAP2Q15057 778 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 PLCL1Q15111 1095 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 XAF1Q6GPH4 301 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CES3Q6UWW8 571 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 PRR23BQ6ZRT6 265 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 BRINP3Q76B58 766 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ANKRD13BQ86YJ7 626 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CCDC60Q8IWA6 550 aaPredicted RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ATP6V0D2Q8N8Y2 350 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 LILRB4Q8NHJ6 448 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ZFP90Q8TF47 636 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 MAELQ96JY0 434 aaKnown RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TCF12Q99081 682 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 SLC39A3Q9BRY0 314 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 LHPPQ9H008 270 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ATP13A3Q9H7F0 1226 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TMEM9Q9P0T7 183 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 AP4E1Q9UPM8 1137 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 PTPRFP10586 1907 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 HDAC3O15379 428 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 PAPSS1O43252 624 aaPredicted RBP10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TPST1O60507 370 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GMNNO75496 209 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 UFL1O94874 794 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GDF11O95390 407 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TYK2P29597 1187 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TTKP33981 857 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 CDH6P55285 790 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TSPY1Q01534 308 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TRPC3Q13507 836 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 HERC3Q15034 1050 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ERMP1Q7Z2K6 904 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 CYP2U1Q7Z449 544 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 PLD5Q8N7P1 536 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ACVR1CQ8NER5 493 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 RTP4Q96DX8 246 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 DUS3LQ96G46 650 aaKnown RBP10.29□□□□□ -0.76
LINC00488-201ENST00000494582 CAB39LQ9H9S4 337 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 KMT5AQ9NQR1 393 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 SNX15Q9NRS6 342 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GPATCH2LQ9NWQ4 482 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 PSME2Q9UL46 239 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 BPTFQ12830 3046 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 CLDN25C9JDP6 229 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 AURKAO14965 403 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 SEC14L2O76054 403 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ALDH1A2O94788 518 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 HMGCRP04035 888 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TFEBP19484 476 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ENDOUP21128 410 aaKnown RBP10.29□□□□□ -0.76
LINC00488-201ENST00000494582 IL4RP24394 825 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 CXCR2P25025 360 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 PSMD8P48556 350 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GTF2A2P52657 109 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 TMBIM6P55061 237 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ZBTB17Q13105 803 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 NDUFA5Q16718 116 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 HADHQ16836 314 aaKnown RBP10.29□□□□□ -0.76
LINC00488-201ENST00000494582 KIZQ2M2Z5 673 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 SEZ6Q53EL9 994 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ATAD3BQ5T9A4 648 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 SEL1L3Q68CR1 1132 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 LAYNQ6UX15 382 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 GALNT13Q8IUC8 556 aa10.29□□□□□ -0.76
LINC00488-201ENST00000494582 ELMOD1Q8N336 334 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms