RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DGKAP23743 735 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 AP3S2P59780 193 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 NOL9Q5SY16 702 aaKnown RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 PIK3R6Q5UE93 754 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 WDR93Q6P2C0 686 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 NET1Q7Z628 596 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 RNF180Q86T96 592 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 ACOT1Q86TX2 421 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 FBXW8Q8N3Y1 598 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 TTC29Q8NA56 475 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 PHF10Q8WUB8 498 aaKnown RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 LENG1Q96BZ8 264 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 RIT2Q99578 217 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 CNPPD1Q9BV87 410 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 FAM126AQ9BYI3 521 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 TRIM2Q9C040 744 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 C17orf75Q9HAS0 396 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 RBM22Q9NW64 420 aaKnown RBP eCLIP7.97□□□□□ -1.13
BRCA1-221ENST00000493795 SOHLH2Q9NX45 425 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 VPS4AQ9UN37 437 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 MINPP1Q9UNW1 487 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 TMEM5Q9Y2B1 443 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 C2CD2Q9Y426 696 aa7.97□□□□□ -1.13
BRCA1-221ENST00000493795 WDR27A2RRH5 827 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 FAM172BPA6NC97 362 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 RSL1D1O76021 490 aaKnown RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 LSM8O95777 96 aaKnown RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PLEKP08567 350 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 ATF6P18850 670 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PRKAG1P54619 331 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 MRPS22P82650 360 aaKnown RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 TCEAL6Q6IPX3 200 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 XRRA1Q6P2D8 792 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 DOK6Q6PKX4 331 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 GPSM1Q86YR5 675 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 CYP4X1Q8N118 509 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 RNF148Q8N7C7 305 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 GPER1Q99527 375 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 SH2D3AQ9BRG2 576 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 MXRA8Q9BRK3 442 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PCDH9Q9HC56 1237 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 OR10H2O60403 315 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 GYPCP04921 128 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 EPORP19235 508 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 SDC2P34741 201 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 SQLEQ14534 574 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PTPAQ15257 358 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 SMIM5Q71RC9 77 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 RAB11FIP2Q7L804 512 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 ATG9AQ7Z3C6 839 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 GPALPP1Q8IXQ4 340 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 STK40Q8N2I9 435 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 FSTL5Q8N475 847 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PTCD2Q8WV60 388 aaKnown RBP7.96□□□□□ -1.13
BRCA1-221ENST00000493795 CGRRF1Q99675 332 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 PSMD13Q9UNM6 376 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 NAALADL1Q9UQQ1 740 aa7.96□□□□□ -1.13
BRCA1-221ENST00000493795 A0A096LPK6 155 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CASKO14936 926 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SPTLC1O15269 473 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ZC3H11AO75152 810 aaKnown RBP eCLIP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ULK1O75385 1050 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PRH1P02810 166 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CCR1P32246 355 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PTPN5P54829 565 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CDH4P55283 916 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 NAA20P61599 178 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SPIBQ01892 262 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF613Q6PF04 617 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SRBD1Q8N5C6 995 aaKnown RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 MINDY2Q8NBR6 621 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 TMEM168Q9H0V1 697 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 KLK14Q9P0G3 267 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 TRHDEQ9UKU6 1024 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 FOXN3O00409 490 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PRLP01236 227 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 C9P02748 559 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 NR2F6P10588 404 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 NR2F1P10589 423 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ITIH1P19827 911 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CYP2B6P20813 491 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 RPL14P50914 215 aaKnown RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CDKL1Q00532 357 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 IL18Q14116 193 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 USF2Q15853 346 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 FNBP1LQ5T0N5 605 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 POU5F2Q8N7G0 328 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 OR2L5Q8NG80 312 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 COL26A1Q96A83 441 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ERGIC2Q96RQ1 377 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SLC39A8Q9C0K1 460 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ARL15Q9NXU5 204 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SPG21Q9NZD8 308 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 UPB1Q9UBR1 384 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PRR12Q9ULL5 1215 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms