RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 IRF9Q00978 393 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CHRNB3Q05901 458 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 SPIDRQ14159 915 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF460Q14592 562 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 TCEAL1Q15170 157 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PPP1R26Q5T8A7 1209 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 XKR5Q6UX68 686 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 ULK4Q96C45 1275 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 EGFL8Q99944 293 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 KCNK13Q9HB14 408 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 NOD1Q9Y239 953 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 HES2Q9Y543 173 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 DCCP43146 1447 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 PSMB9P28065 219 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 CD151P48509 253 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ENTPD1P49961 510 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 CCNIQ14094 377 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 LIPMQ5VYY2 423 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 NANOGNBQ7Z5D8 188 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ERO1BQ86YB8 467 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 SPPL2CQ8IUH8 684 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ZFP28Q8NHY6 868 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 FAM162AQ96A26 154 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ABHD8Q96I13 439 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 CRYL1Q9Y2S2 319 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.32
SHOX2-205ENST00000490689 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.32
SHOX2-205ENST00000490689 J3QRK9 145 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 PDLIM1O00151 329 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 IRF6O14896 467 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.32
SHOX2-205ENST00000490689 NFKB1P19838 968 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ACADSBP45954 432 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 BCAT1P54687 386 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 CDH17Q12864 832 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 MYLK3Q32MK0 819 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.32
SHOX2-205ENST00000490689 BLOC1S5Q8TDH9 187 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 FBXL8Q96CD0 374 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 PGLYRP2Q96PD5 576 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.32
SHOX2-205ENST00000490689 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 CDT1Q9H211 546 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 DNAJC28Q9NX36 388 aa13.02□□□□□ -0.32
SHOX2-205ENST00000490689 APOA1P02647 267 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 RAD23AP54725 363 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 BACE1P56817 501 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
SHOX2-205ENST00000490689 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.33
SHOX2-205ENST00000490689 C11orf91Q3C1V1 193 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 C9orf16Q9BUW7 83 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 ALG9Q9H6U8 611 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CHD4Q14839 1912 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 BNIP3LO60238 219 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CBFA2T3O75081 653 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 TADA2AO75478 443 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 HMBSP08397 361 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CCDC166P0CW27 439 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CYP2C8P10632 490 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 AKAP5P24588 427 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 WNT7BP56706 349 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 PSTKQ8IV42 348 aaKnown RBP13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 CCDC106Q9BWC9 280 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 TLE6Q9H808 572 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 ZFYVE28Q9HCC9 887 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 MYOZ2Q9NPC6 264 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 SIRPGQ9P1W8 387 aa13.02□□□□□ -0.33
SHOX2-205ENST00000490689 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM233B4DJY2 109 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 KLF11O14901 512 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 BAG6P46379 1132 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 YAP1P46937 504 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 IL5RAQ01344 420 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 MAP3K10Q02779 954 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 VPS72Q15906 364 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 FAR2Q96K12 515 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF560Q96MR9 790 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 ARMC7Q9H6L4 198 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 AFF4Q9UHB7 1163 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 ATRNL1Q5VV63 1379 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms