RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 GMEB2Q9UKD1 530 aa6.2□□□□□ -1.42
CDHR3-213ENST00000488386 SH3BP1Q9Y3L3 701 aa6.2□□□□□ -1.42
CDHR3-213ENST00000488386 DNAH14Q0VDD8 3507 aa6.2□□□□□ -1.42
CDHR3-213ENST00000488386 PTPRZ1P23471 2315 aaPredicted RBP6.2□□□□□ -1.42
CDHR3-213ENST00000488386 SDK1Q7Z5N4 2213 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 FAM92AA1XBS5 289 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 NEDD8-MDP1E9PL57 170 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 SGK1O00141 431 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 SLC16A3O15427 465 aaKnown RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 KLF8O95600 359 aaPredicted RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 SNRPB2P08579 225 aaKnown RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 CCDC192P0DO97 292 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 CD19P15391 556 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 PRKCAP17252 672 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 DRD1P21728 446 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 BCKDHBP21953 392 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 GTF2H1P32780 548 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 PPP3CCP48454 512 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 FMO5P49326 533 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RGS7P49802 495 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 KIF11P52732 1056 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 GFRA1P56159 465 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 FKBP3Q00688 224 aaKnown RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 MVKQ03426 396 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 EFEMP1Q12805 493 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 CUL2Q13617 745 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 MORC3Q14149 939 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 C10orf120Q5SQS8 335 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 YOD1Q5VVQ6 348 aaPredicted RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TCEAL6Q6IPX3 200 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 DENND5AQ6IQ26 1287 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ANO7Q6IWH7 933 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TTI2Q6NXR4 508 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 GJB7Q6PEY0 223 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 C1orf228Q6PIY5 440 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TOGARAM2Q6ZUX3 1019 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 PIGZQ86VD9 579 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 CCDC103Q8IW40 242 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ALLCQ8N6M5 410 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 UBR7Q8N806 425 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TXNDC5Q8NBS9 432 aaKnown RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 CCDC150Q8NCX0 1101 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 NUP43Q8NFH3 380 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 USP33Q8TEY7 942 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RLN3Q8WXF3 142 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 OVCA2Q8WZ82 227 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TFAP2BQ92481 460 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TCEAL3Q969E4 200 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TMEM176AQ96HP8 235 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TIGD1Q96MW7 591 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 DEPDC7Q96QD5 511 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ZSWIM1Q9BR11 485 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 DUSP16Q9BY84 665 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ULBP1Q9BZM6 244 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ARRDC1-AS1Q9H2J1 176 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 SEMA4AQ9H3S1 761 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TLR8Q9NR97 1041 aaKnown RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RXFP3Q9NSD7 469 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 EHD2Q9NZN4 543 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ARMCX3Q9UH62 379 aaPredicted RBP6.19□□□□□ -1.42
CDHR3-213ENST00000488386 TSPAN16Q9UKR8 245 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 ACSL6Q9UKU0 697 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RNF114Q9Y508 228 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RAD54BQ9Y620 910 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 OTOGLQ3ZCN5 2332 aa6.19□□□□□ -1.42
CDHR3-213ENST00000488386 RIF1Q5UIP0 2472 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MYO18AQ92614 2054 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MED19A0JLT2 244 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PSMA7O14818 248 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MSI1O43347 362 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TULP3O75386 442 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 RPP40O75818 363 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 KAT7O95251 611 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PAPSS2O95340 614 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 KLKB1P03952 638 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 APODP05090 189 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SCG5P05408 212 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 LCP1P13796 627 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TACR1P25103 407 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 ATP5C1P36542 298 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 ECI1P42126 302 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PDE6CP51160 858 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TKTL1P51854 596 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 DGKEP52429 567 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 LRRC63Q05C16 580 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 ADIGQ0VDE8 80 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SF3A2Q15428 464 aaKnown RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MLANAQ16655 118 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 COBLL1Q53SF7 1204 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 HSP90AA4PQ58FG1 418 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SNX30Q5VWJ9 437 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 HLA-DQA1Q5Y7H0 255 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 GALNT18Q6P9A2 607 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TMEM270Q6UE05 265 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 BHLHA9Q7RTU4 235 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 WDR5BQ86VZ2 330 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PPM1KQ8N3J5 372 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SYNPOQ8N3V7 929 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 DEFB119Q8N690 84 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms