RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 UBE2TQ9NPD8 197 aaPredicted RBP19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 TBC1D30Q9Y2I9 924 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 DOCK9Q9BZ29 2069 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 RNF103O00237 685 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 KPNA3O00505 521 aaPredicted RBP19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 CLDN11O75508 207 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 GRAP2O75791 330 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 DXOO77932 396 aaKnown RBP19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 GLI1P08151 1106 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 ALPPL2P10696 532 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 HNRNPA2B1P22626 353 aaKnown RBP19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 CHRNA3P32297 505 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 CLDN2P57739 230 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 GCNT7Q6ZNI0 430 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 LSMEM2Q8N112 164 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 SLC22A18ASQ8N1D0 253 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 OR2A12Q8NGT7 310 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 CPXM1Q96SM3 734 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 PSMB7Q99436 277 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 MUC3BQ9H195 1237 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 ASNSD1Q9NWL6 643 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 NLGN3Q9NZ94 848 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 MAN1B1Q9UKM7 699 aa19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 ZFR2Q9UPR6 939 aaKnown RBP19.93■□□□□ 0.78
SMPDL3A-202ENST00000487215 LY6G6EA0A0G2JKS1 128 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 K7ERQ8 282 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 SNAP91O60641 907 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 HSF2BPO75031 334 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 USP12O75317 370 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 CSO75390 466 aaKnown RBP19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 PAGE1O75459 146 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 AFPP02771 609 aaKnown RBP19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 PPP1R2P41236 205 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 CDH4P55283 916 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 TMPRSS3P57727 454 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 NME3Q13232 169 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 C5orf22Q49AR2 442 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 TAF1BQ53T94 588 aaPredicted RBP19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 BROXQ5VW32 411 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 ABI3BPQ7Z7G0 1075 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 WDTC1Q8N5D0 677 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 ATP11CQ8NB49 1132 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 TMIEQ8NEW7 156 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 NELFBQ8WX92 580 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 CCDC114Q96M63 670 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 CPNE5Q9HCH3 593 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 VPS51Q9UID3 782 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 FARP1Q9Y4F1 1045 aaPredicted RBP19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 U3KQA8 63 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 ZNF462Q96JM2 2506 aa19.92■□□□□ 0.78
SMPDL3A-202ENST00000487215 MGAQ8IWI9 3026 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 CNTN5O94779 1100 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 GP1BAP07359 652 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 RRM1P23921 792 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 LSSP48449 732 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 UCNP55089 124 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 ERVPABLB-1P60509 514 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 KRT83P78385 493 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 CCDC15Q0P6D6 951 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 MTA1Q13330 715 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 ZNF542PQ5EBM4 170 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 EFHC1Q5JVL4 640 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 SEL1L3Q68CR1 1132 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 FOXR2Q6PJQ5 311 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 FAM183BPQ6ZVS7 135 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 CHST14Q8NCH0 376 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 IFT43Q96FT9 208 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 PPP1R13BQ96KQ4 1090 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 TIGD1Q96MW7 591 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 POLR1BQ9H9Y6 1135 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 DYRK4Q9NR20 520 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 HOOK1Q9UJC3 728 aaKnown RBP19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 CTNND2Q9UQB3 1225 aa19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMPDL3A-202ENST00000487215 GOLGA6L4A6NEF3 574 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 CAPN8A6NHC0 703 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 BECN2A8MW95 431 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 PPP1R3GB7ZBB8 358 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 K7ESM1 405 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 SCAMP1O15126 338 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 SMAD6O43541 496 aaKnown RBP19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 PCDH8O95206 1070 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 PRNPP04156 253 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 RHOCP08134 193 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 BMP6P22004 513 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 MARSP56192 900 aaKnown RBP19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 RHDQ02161 417 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 TMEM259Q4ZIN3 620 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 ALFQ53S48 1182 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 ARHGAP40Q5TG30 622 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 OTUD1Q5VV17 481 aaPredicted RBP19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 OR6B2Q6IFH4 312 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 GJB7Q6PEY0 223 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 Q6ZSR6 202 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 ERN2Q76MJ5 926 aaKnown RBP19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 ENOSF1Q7L5Y1 443 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 PASD1Q8IV76 773 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 FAM181AQ8N9Y4 354 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 KCNE4Q8WWG9 221 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 C2orf49Q9BVC5 232 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms