RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SEL1L3Q68CR1 1132 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 UNC5BQ8IZJ1 945 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 FAM174AQ8TBP5 190 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 CLPBQ9H078 707 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 SEMA6CQ9H3T2 930 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 BLOC1S4Q9NUP1 217 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 HMGXB4Q9UGU5 601 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 STOML2Q9UJZ1 356 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 DOLKQ9UPQ8 538 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 ENTPD4Q9Y227 616 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 LMO7DNF2Z398 122 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 RAD51BO15315 384 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 RAD1O60671 282 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 MOCS3O95396 460 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PDGFAP04085 211 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 NNMTP40261 264 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 NDST1P52848 882 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PTK2BQ14289 1009 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 NADK2Q4G0N4 442 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 NEK5Q6P3R8 708 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 CCNJLQ8IV13 435 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 APCDD1Q8J025 514 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 ARL10Q8N8L6 244 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 LURAP1Q96LR2 239 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 INTS2Q9H0H0 1204 aaKnown RBP12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 GPR27Q9NS67 375 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 AKAP7Q9P0M2 348 aaPredicted RBP12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 PCSK5Q92824 1860 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 MTORP42345 2549 aa12.52□□□□□ -0.41
ATPAF1-205ENST00000487193 LOC101059948A0A1B0GTJ6 334 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 BNIP3LO60238 219 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 PHACTR2O75167 634 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 PAK4O96013 591 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 C4BPAP04003 597 aaKnown RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CELA2BP08218 269 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 TSHRP16473 764 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 TCN2P20062 427 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 RABIFP47224 123 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CASP5P51878 434 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 COPB1P53618 953 aaKnown RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 INPP5JQ15735 1006 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 ME3Q16798 604 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 MPP7Q5T2T1 576 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CCDC117Q8IWD4 279 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 PHACTR4Q8IZ21 702 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 ZNF557Q8N988 423 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 NDRG1Q92597 394 aaKnown RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 RAD54LQ92698 747 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CCDC127Q96BQ5 260 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 CALML4Q96GE6 196 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 HAPLN3Q96S86 360 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 LRRC61Q9BV99 259 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 B3GALT1Q9Y5Z6 326 aa12.51□□□□□ -0.41
ATPAF1-205ENST00000487193 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 FGF3P11487 239 aaPredicted RBP12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 ATICP31939 592 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 RPS24P62847 133 aaKnown RBP12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 CDH18Q13634 790 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 ZNF667Q5HYK9 610 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 EFHC2Q5JST6 749 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 SLITRK4Q8IW52 837 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 CFAP52Q8N1V2 620 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 ARHGAP18Q8N392 663 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 RCBTB1Q8NDN9 531 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 MYEOVQ96EZ4 313 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 SLC29A3Q9BZD2 475 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 KCTD3Q9Y597 815 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 CROCCQ5TZA2 2017 aa12.5□□□□□ -0.41
ATPAF1-205ENST00000487193 TRPM6Q9BX84 2022 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms