RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ASLP04424 464 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 DLDP09622 509 aaKnown RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 C7P10643 843 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 RBL1P28749 1068 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 STIP1P31948 543 aaKnown RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 CTSOP43234 321 aaPredicted RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 FNTAP49354 379 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 CLCN6P51797 869 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 ECT2LQ008S8 904 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 CCINQ13939 588 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 RFTN1Q14699 578 aaPredicted RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 CCDC181Q5TID7 509 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 IL31Q6EBC2 164 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 ALG1LQ6GMV1 187 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 TIGD7Q6NT04 549 aaPredicted RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 CCDC13Q8IYE1 715 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 ATPAF2Q8N5M1 289 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 CNTD1Q8N815 330 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 KCNV2Q8TDN2 545 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 NECAB3Q96P71 396 aaPredicted RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 C10orf88Q9H8K7 445 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 RRAGDQ9NQL2 400 aaPredicted RBP16.15■□□□□ 0.18
APOE-205ENST00000485628 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 ACTL7AQ9Y615 435 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 C5orf60A6NFR6 353 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CBX4O00257 560 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 MTSS1O43312 755 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 ZNF189O75820 626 aaPredicted RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 APODP05090 189 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 SRPRAP08240 638 aaKnown RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 DRD1P21728 446 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CHRNA3P32297 505 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 PTGIRP43119 386 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 SERPINH1P50454 418 aaKnown RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 GDF10P55107 478 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 KDSRQ06136 332 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CKAP4Q07065 602 aaKnown RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 SLC10A7Q0GE19 358 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 PON2Q15165 354 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CYTH1Q15438 398 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CDKL3Q8IVW4 592 aaPredicted RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 KLHDC8BQ8IXV7 354 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 PLPP6Q8IY26 295 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 ALLCQ8N6M5 410 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 ATL2Q8NHH9 583 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 FRS2Q8WU20 508 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 HTR3CQ8WXA8 447 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 MAGOHBQ96A72 148 aaKnown RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 ISG20Q96AZ6 181 aaKnown RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 TMEM121Q9BTD3 319 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 SPON2Q9BUD6 331 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 TMEM245Q9H330 911 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 THAP10Q9P2Z0 257 aaPredicted RBP16.14■□□□□ 0.17
APOE-205ENST00000485628 AMACRQ9UHK6 382 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 MUTYHQ9UIF7 546 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
APOE-205ENST00000485628 CFAP69A5D8W1 941 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 TBC1D3BA6NDS4 549 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 H7C0C1 242 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 MAN2B1O00754 1011 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 SMAD6O43541 496 aaKnown RBP16.13■□□□□ 0.17
APOE-205ENST00000485628 SRCP12931 536 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 CCNB1P14635 433 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
APOE-205ENST00000485628 CR2P20023 1033 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 PTPN3P26045 913 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 ATP5OP48047 213 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 KCNJ1P48048 391 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 ZXDAP98168 799 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 ZBTB17Q13105 803 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 SNX1Q13596 522 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 TEX44Q53QW1 395 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 TMCO4Q5TGY1 634 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 RETSATQ6NUM9 610 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 TPRG1Q6ZUI0 275 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 PGBD5Q8N414 524 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 SORCS1Q8WY21 1168 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 FAM3CQ92520 227 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 PSKH2Q96QS6 385 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 VAT1Q99536 393 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 DDX47Q9H0S4 455 aaKnown RBP16.13■□□□□ 0.17
APOE-205ENST00000485628 ARHGEF3Q9NR81 526 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 SLCO3A1Q9UIG8 710 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 ATP8A1Q9Y2Q0 1164 aa16.13■□□□□ 0.17
APOE-205ENST00000485628 CKAP5Q14008 2032 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 GOLGA6L10A0A0M3HER8 536 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 BHMG1C9JSJ3 638 aaPredicted RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 K7ERQ8 282 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 KCNK1O00180 336 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 NPC1O15118 1278 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 MUSKO15146 869 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 GCATO75600 419 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 EGFP01133 1207 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 ATP5BP06576 529 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 CHRNB1P11230 501 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 CD68P34810 354 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms