RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 UCHL3P15374 230 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 EEF1GP26641 437 aaKnown RBP11.74□□□□□ -0.53
SCFD1-206ENST00000484733 GGCXP38435 758 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
SCFD1-206ENST00000484733 ILKQ13418 452 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 STAT4Q14765 748 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 FAM102AQ5T9C2 384 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-206ENST00000484733 MDM1Q8TC05 714 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF212Q9UDV6 495 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 DAAM1Q9Y4D1 1078 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 CABIN1Q9Y6J0 2220 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 SNAP91O60641 907 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 MT-CO1P00395 513 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 ACADVLP49748 655 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 NOMO3P69849 1222 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
SCFD1-206ENST00000484733 BNIP3Q12983 259 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 DHRS13Q6UX07 377 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 NOP9Q86U38 636 aaKnown RBP11.73□□□□□ -0.53
SCFD1-206ENST00000484733 EID2Q8N6I1 236 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 ATP11CQ8NB49 1132 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 FAM174AQ8TBP5 190 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 CEP44Q9C0F1 390 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 SNX10Q9Y5X0 201 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 IGF2RP11717 2491 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 ZFHX4Q86UP3 3567 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 DOCK4Q8N1I0 1966 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
SCFD1-206ENST00000484733 FLT3P36888 993 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 NUMBP49757 651 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 TMEM145Q8NBT3 493 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 ARRDC3Q96B67 414 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 NUP62CLQ9H1M0 184 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 F8VZ95 297 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 MAT2AP31153 395 aaKnown RBP11.72□□□□□ -0.53
SCFD1-206ENST00000484733 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 TRNP1Q6NT89 227 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 C22orf39Q6P5X5 142 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 ZSCAN30Q86W11 494 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 KLHDC7BQ96G42 594 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 SAMSN1Q9NSI8 373 aaKnown RBP11.72□□□□□ -0.53
SCFD1-206ENST00000484733 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 IL36AQ9UHA7 158 aa11.72□□□□□ -0.53
SCFD1-206ENST00000484733 A0A0D9SEW6 157 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 K7ERQ8 282 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 SMAD6O43541 496 aaKnown RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF821O75541 412 aaPredicted RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 CYP1A1P04798 512 aaPredicted RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 CKMT2P17540 419 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 OR1E1P30953 314 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 CYP4F3Q08477 520 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF284Q2VY69 593 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 RETSATQ6NUM9 610 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 FBXL19Q6PCT2 694 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 ERN2Q76MJ5 926 aaKnown RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 PCDH20Q8N6Y1 951 aaKnown RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 ENOX1Q8TC92 643 aaKnown RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 RFFLQ8WZ73 363 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 IFT43Q96FT9 208 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 GANQ9H2C0 597 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 DYRK4Q9NR20 520 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 TMPRSS4Q9NRS4 437 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 KLHL11Q9NVR0 708 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 NOCTQ9UK39 431 aaKnown RBP11.71□□□□□ -0.53
SCFD1-206ENST00000484733 RAXQ9Y2V3 346 aa11.71□□□□□ -0.53
SCFD1-206ENST00000484733 A0A1W2PQU0 124 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.54
SCFD1-206ENST00000484733 MMEP08473 750 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 RRM1P23921 792 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 ACP1P24666 158 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 AKT2P31751 481 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 HNF1BP35680 557 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 DNAJC3Q13217 504 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 PROX2Q3B8N5 592 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 MARCH9Q86YJ5 346 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 CHST14Q8NCH0 376 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 OR7D4Q8NG98 312 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 PPP1R16AQ96I34 528 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 HS3ST3A1Q9Y663 406 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 WASF2Q9Y6W5 498 aa11.71□□□□□ -0.54
SCFD1-206ENST00000484733 FAM208BQ5VWN6 2430 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 A0A087WV48 116 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 FAM149AA5PLN7 773 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 GOLGA8SH3BPF8 625 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 CBX4O00257 560 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 AP1G1O43747 822 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 HNRNPA2B1P22626 353 aaKnown RBP11.7□□□□□ -0.54
SCFD1-206ENST00000484733 ETFBP38117 255 aa11.7□□□□□ -0.54
SCFD1-206ENST00000484733 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms