RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 ATP13A1Q9HD20 1204 aa15.37■□□□□ 0.05
TDP2-205ENST00000480495 SARDHQ9UL12 918 aa15.37■□□□□ 0.05
TDP2-205ENST00000480495 NUMA1Q14980 2115 aa15.37■□□□□ 0.05
TDP2-205ENST00000480495 ASCC3Q8N3C0 2202 aaKnown RBP15.36■□□□□ 0.05
TDP2-205ENST00000480495 CBX4O00257 560 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 BNIP3LO60238 219 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 ZMPSTE24O75844 475 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 LRIG2O94898 1065 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 RRM1P23921 792 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 PRKCIP41743 596 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 AIF1P55008 147 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 CCDC15Q0P6D6 951 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 HLA-BQ31612 363 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 FIGNQ5HY92 759 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 C22orf39Q6P5X5 142 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 DCUN1D2Q6PH85 259 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 LINGO4Q6UY18 593 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 ADAT2Q7Z6V5 191 aaKnown RBP15.36■□□□□ 0.05
TDP2-205ENST00000480495 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 NLRP14Q86W24 1093 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 CCDC185Q8N715 623 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 TMIEQ8NEW7 156 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 OR2A12Q8NGT7 310 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 ACE2Q9BYF1 805 aaPredicted RBP15.36■□□□□ 0.05
TDP2-205ENST00000480495 CEP44Q9C0F1 390 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 TTYH3Q9C0H2 523 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 TMEM248Q9NWD8 314 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 ANKRD6Q9Y2G4 727 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 PCDHGB2Q9Y5G2 931 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 SLCO1B1Q9Y6L6 691 aa15.36■□□□□ 0.05
TDP2-205ENST00000480495 ADAMTS9Q9P2N4 1935 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3DA0A087WVF3 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3IA0A087WXS9 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3EA0A087X179 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3KA0A087X1G2 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3FA6NER0 549 aaPredicted RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3LB9A6J9 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 FAM72CH0Y354 149 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 K7ERQ8 282 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 VILLO15195 856 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 CCP110O43303 1012 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 SMAD6O43541 496 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 PLRG1O43660 514 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 PRNPP04156 253 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3HP0C7X1 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 GZMAP12544 262 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 GLDCP23378 1020 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 L1CAMP32004 1257 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 CHRNA3P32297 505 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 NUDT1P36639 197 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 RECQLP46063 649 aaPredicted RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 SERPINH1P50454 418 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 METAP1P53582 386 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 GEMIN4P57678 1058 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 CNTN1Q12860 1018 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 KIF19Q2TAC6 998 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 FAM72AQ5TYM5 149 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3GQ6DHY5 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3CQ6IPX1 549 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 FAM72DQ6L9T8 149 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 SCYL2Q6P3W7 929 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 FAM72BQ86X60 149 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 NAXDQ8IW45 347 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TBC1D3Q8IZP1 549 aaPredicted RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
TDP2-205ENST00000480495 MAGEH1Q9H213 219 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 HAUS4Q9H6D7 363 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TM7SF3Q9NS93 570 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 PARVAQ9NVD7 372 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 TAS2R14Q9NYV8 317 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 NEU3Q9UQ49 428 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 SNX11Q9Y5W9 270 aa15.35■□□□□ 0.05
TDP2-205ENST00000480495 LATO43561 262 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 SH3BP5O60239 455 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 DFNA5O60443 496 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 RTN2O75298 545 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 C21orf59P57076 290 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 SIM1P81133 766 aaPredicted RBP15.34■□□□□ 0.05
TDP2-205ENST00000480495 FANCCQ00597 558 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 MAMLD1Q13495 774 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 PLEKHA7Q6IQ23 1121 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 ZNF571Q7Z3V5 609 aaPredicted RBP15.34■□□□□ 0.05
TDP2-205ENST00000480495 PRPF39Q86UA1 669 aaKnown RBP15.34■□□□□ 0.05
TDP2-205ENST00000480495 LUZP1Q86V48 1076 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 ARHGEF2Q92974 986 aaKnown RBP15.34■□□□□ 0.05
TDP2-205ENST00000480495 CNTNAP3BQ96NU0 1288 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 CNTNAP3Q9BZ76 1288 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 IL21RQ9HBE5 538 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 PREBQ9HCU5 417 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 DYRK4Q9NR20 520 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 HPCAL4Q9UM19 191 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 FNDC3AQ9Y2H6 1198 aaKnown RBP15.34■□□□□ 0.05
TDP2-205ENST00000480495 PCDHB9Q9Y5E1 797 aa15.34■□□□□ 0.05
TDP2-205ENST00000480495 SPAARA0A1B0GVQ0 90 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms