RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KNL1Q8NG31 2342 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 TMEM8BA6NDV4 472 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 WASH3PC4AMC7 463 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 SPOPO43791 374 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CACNG3O60359 315 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 LRIG2O94898 1065 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 LUC7L3O95232 432 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 CFIP05156 583 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 RARAP10276 462 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 COMTP21964 271 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 NTSR1P30989 418 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CD70P32970 193 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 HOXD12P35452 270 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 DGKGP49619 791 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 SIM1P81133 766 aaPredicted RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 SLC25A11Q02978 314 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 SCAPQ12770 1279 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CDH18Q13634 790 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 COL9A2Q14055 689 aaPredicted RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 TCEAL1Q15170 157 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 HADHQ16836 314 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 DUOXA1Q1HG43 343 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 FSCBQ5H9T9 825 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 RAB44Q7Z6P3 723 aaPredicted RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 ZNF683Q8IZ20 524 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CCAR2Q8N163 923 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 TXLNBQ8N3L3 684 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CHCHD4Q8N4Q1 142 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 MINDY1Q8N5J2 469 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 ZCCHC14Q8WYQ9 949 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 TBC1D31Q96DN5 1066 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 NCAPGQ9BPX3 1015 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 GTPBP2Q9BX10 602 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 OSBPL2Q9H1P3 480 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.3□□□□□ -0.92
VCP-206ENST00000480327 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 LCMT1Q9UIC8 334 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 PPP2R2CQ9Y2T4 447 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 ALG6Q9Y672 507 aa9.3□□□□□ -0.92
VCP-206ENST00000480327 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
VCP-206ENST00000480327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 A0A1B0GVM2 712 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 DRGXA6NNA5 263 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 BTNL10A8MVZ5 291 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 EEF2KO00418 725 aaKnown RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 ARHGAP33O14559 1287 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 DAPK3O43293 454 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 PALMO75781 387 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 GOT1P17174 413 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 EPHB2P29323 1055 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 HLA-FP30511 346 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 L1CAMP32004 1257 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 MAN1A1P33908 653 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 AIF1P55008 147 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 HADHBP55084 474 aaKnown RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 CDH6P55285 790 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 TPI1P60174 286 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 ZNF177Q13360 481 aaPredicted RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 KRT81Q14533 505 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 GEN1Q17RS7 908 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 BOLA3Q53S33 107 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 MPP7Q5T2T1 576 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 ARTNQ5T4W7 220 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 MANEALQ5VSG8 457 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 KCTD6Q8NC69 237 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 OR52K2Q8NGK3 314 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 ZNF419Q96HQ0 510 aaPredicted RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 MRGPRX1Q96LB2 322 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 HSPA12BQ96MM6 686 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 EPAS1Q99814 870 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 ZYG11BQ9C0D3 744 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 TRMT1Q9NXH9 659 aaKnown RBP9.29□□□□□ -0.92
VCP-206ENST00000480327 CACNA2D2Q9NY47 1150 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 DNAI1Q9UI46 699 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 GGA2Q9UJY4 613 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 FBXO10Q9UK96 956 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 PYCARDQ9ULZ3 195 aa9.29□□□□□ -0.92
VCP-206ENST00000480327 DOCK4Q8N1I0 1966 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CABIN1Q9Y6J0 2220 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 IGLV3-10A0A075B6K4 115 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 GRID2IPA4D2P6 1211 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 KRT86O43790 486 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SH3BP5O60239 455 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CLDN11O75508 207 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 FTCDO95954 541 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 KRT1P04264 644 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 RHOCP08134 193 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 KRT7P08729 469 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CD48P09326 243 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 PABPC1P11940 636 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 MAOBP27338 520 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 MZF1P28698 734 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 OR1E1P30953 314 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CSKP41240 450 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms