RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 SEMA4BQ9NPR2 832 aaPredicted RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 RNF146Q9NTX7 359 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 ANAPC4Q9UJX5 808 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 PCDHA12Q9UN75 941 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 LY6G6EA0A0G2JKS1 128 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 A6NNC1 897 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TULP3O75386 442 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 WDHD1O75717 1129 aaPredicted RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 NDUFB8O95169 186 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 CBX6O95503 412 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 POLBP06746 335 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 CHRNB1P11230 501 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 PRKCHP24723 683 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 HNF1BP35680 557 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 MTNR1AP48039 350 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 WDR45BQ5MNZ6 344 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 SH2D4BQ5SQS7 431 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 GJB7Q6PEY0 223 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TRAPPC11Q7Z392 1133 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TMTC2Q8N394 836 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 NRACQ8N912 160 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 ZNF548Q8NEK5 533 aaPredicted RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 CMASQ8NFW8 434 aaPredicted RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TMEM174Q8WUU8 243 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 FAR1Q8WVX9 515 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 MSI2Q96DH6 328 aaKnown RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TEFMQ96QE5 360 aaKnown RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 TTC12Q9H892 705 aaPredicted RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 FZD3Q9NPG1 666 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 PNRC2Q9NPJ4 139 aaKnown RBP4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 POT1Q9NUX5 634 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 GTF2A1LQ9UNN4 478 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 ICKQ9UPZ9 632 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 OSGIN2Q9Y236 505 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 SLC4A4Q9Y6R1 1079 aa4.25□□□□□ -1.73
SMARCA1-204ENST00000478420 MST1RQ04912 1400 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TRBV5-7A0A0A0MS05 114 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TMEM272A0A1B0GTI8 110 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 OR6C68A6NDL8 312 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 C17orf100A8MU93 164 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 KIF1CO43896 1103 aaKnown RBP4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 ATG13O75143 517 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TMCC1O94876 653 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 DDAH2O95865 285 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 SYF2O95926 243 aaKnown RBP4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 PYGLP06737 847 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 PGM1P36871 562 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 NR4A2P43354 598 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 CCR5P51681 352 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 SETQ01105 290 aaPredicted RBP4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TRPC3Q13507 836 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 LAMB3Q13751 1172 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 PIM3Q86V86 326 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 HDAC7Q8WUI4 952 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 NLRP4Q96MN2 994 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 CD180Q99467 661 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TAOK3Q9H2K8 898 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 TMEM160Q9NX00 188 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 ZDHHC7Q9NXF8 308 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 RAP2CQ9Y3L5 183 aa4.24□□□□□ -1.73
SMARCA1-204ENST00000478420 INO80B-WBP1J3KQ70 363 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 HOXC11O43248 304 aaPredicted RBP4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GUCY1B2O75343 617 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 EPN2O95208 641 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 IFNA2P01563 188 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 IFIT1P09914 478 aaKnown RBP4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 PSMC2P35998 433 aaKnown RBP4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 CLCNKBP51801 687 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 VAMP2P63027 116 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 TWIST1Q15672 202 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 RETSATQ6NUM9 610 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 COLCA1Q6ZS62 124 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 LRRC8DQ7L1W4 858 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 CAMK1DQ8IU85 385 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GHDCQ8N2G8 530 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 LRRC57Q8N9N7 239 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 SETD9Q8NE22 299 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 TBATAQ96M53 351 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 FCRL4Q96PJ5 515 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GPR63Q9BZJ6 419 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 MROH8Q9H579 483 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GGA3Q9NZ52 723 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GRHL1Q9NZI5 618 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 TBC1D14Q9P2M4 693 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 HDAC6Q9UBN7 1215 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 FBXO40Q9UH90 709 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 CDH22Q9UJ99 828 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 GJD2Q9UKL4 321 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 RPS6KL1Q9Y6S9 549 aa4.23□□□□□ -1.73
SMARCA1-204ENST00000478420 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 TARSL2A2RTX5 802 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 GAGE12JA6NER3 117 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 FAM90A7PA6NKC0 464 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms