RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MTF2Q9Y483 593 aaPredicted RBP15.66■□□□□ 0.1
SEC13-215ENST00000477547 ANTXRLA6NF34 631 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 FAM170BA6NMN3 283 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 APOC4-APOC2K7ER74 178 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 CEP104O60308 925 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 APOC2P02655 101 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 CHRNB1P11230 501 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 TCP1P17987 556 aaKnown RBP15.65■□□□□ 0.1
SEC13-215ENST00000477547 MX2P20592 715 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 TIE1P35590 1138 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 GARSP41250 739 aaKnown RBP15.65■□□□□ 0.1
SEC13-215ENST00000477547 STK19P49842 368 aaPredicted RBP15.65■□□□□ 0.1
SEC13-215ENST00000477547 ARF5P84085 180 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 FNDC3BQ53EP0 1204 aaKnown RBP15.65■□□□□ 0.1
SEC13-215ENST00000477547 LINGO4Q6UY18 593 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 ARHGAP36Q6ZRI8 547 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 Q6ZS52 159 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 SLC13A5Q86YT5 568 aaPredicted RBP15.65■□□□□ 0.1
SEC13-215ENST00000477547 KIAA2013Q8IYS2 634 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 ZNF687Q8N1G0 1237 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 P3H4Q92791 437 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 PBKQ96KB5 322 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 OLFM3Q96PB7 478 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 NELL2Q99435 816 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 ERVW-1Q9UQF0 538 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 RAD54BQ9Y620 910 aa15.65■□□□□ 0.1
SEC13-215ENST00000477547 A0A0A0MRY4 1105 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 PPP1R12AO14974 1030 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 TIMM44O43615 452 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 KDELR3O43731 214 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 ZMPSTE24O75844 475 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 CASQ1P31415 396 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 KIR2DL1P43626 348 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 GEMIN4P57678 1058 aaKnown RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 ST8SIA6P61647 398 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 ECT2LQ008S8 904 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 SLC10A2Q12908 348 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 KLF1Q13351 362 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 ZNF234Q14588 700 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 E2F5Q15329 346 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 PTPRNQ16849 979 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 C2orf27AQ580R0 203 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 RETSATQ6NUM9 610 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 LEKR1Q6ZMV7 388 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 CCDC26Q8TAB7 109 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 USP33Q8TEY7 942 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 HDAC11Q96DB2 347 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 RPL10LQ96L21 214 aaKnown RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 OSBPL6Q9BZF3 934 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 PDFQ9HBH1 243 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 SAE1Q9UBE0 346 aaPredicted RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 IPO11Q9UI26 975 aaKnown RBP15.64■□□□□ 0.09
SEC13-215ENST00000477547 STARD13Q9Y3M8 1113 aa15.64■□□□□ 0.09
SEC13-215ENST00000477547 FRYLO94915 3013 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 TCRBV7S2A1N4TA0A589 114 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 KIF2AO00139 706 aaPredicted RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 NCAM2O15394 837 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 PRAMEF11O60813 436 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 FGGP02679 453 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 SRPRAP08240 638 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 AOC1P19801 751 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 NR2C2P49116 596 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 SERPINH1P50454 418 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 MRPS21P82921 87 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 OTUD4Q01804 1114 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 IL10RBQ08334 325 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 PDK1Q15118 436 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 NOMO1Q15155 1222 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 EMC10Q5UCC4 262 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 PAPD7Q5XG87 772 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 SERPINA13PQ6UXR4 307 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 TRMT11Q7Z4G4 463 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 ADAT2Q7Z6V5 191 aaKnown RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 CHPFQ8IZ52 775 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 SYNPOQ8N3V7 929 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 ALLCQ8N6M5 410 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 DTWD2Q8NBA8 298 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 RPLP0P6Q8NHW5 317 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 ACTL9Q8TC94 416 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 COG1Q8WTW3 980 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 MRGPRX3Q96LB0 322 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 ACOX2Q99424 681 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 FAM118BQ9BPY3 351 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 LMAN1LQ9HAT1 526 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 CACNA2D2Q9NY47 1150 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 THAP10Q9P2Z0 257 aaPredicted RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 UBA2Q9UBT2 640 aaPredicted RBP15.63■□□□□ 0.09
SEC13-215ENST00000477547 HCN2Q9UL51 889 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 PLA2G4CQ9UP65 541 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 HS3ST2Q9Y278 367 aa15.63■□□□□ 0.09
SEC13-215ENST00000477547 J3KR12 359 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 PGRMC1O00264 195 aaKnown RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 CES2O00748 559 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 MCF2LO15068 1137 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 NPC1O15118 1278 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 MAFKO60675 156 aa15.62■□□□□ 0.09
SEC13-215ENST00000477547 KLF8O95600 359 aaPredicted RBP15.62■□□□□ 0.09
SEC13-215ENST00000477547 SRCP12931 536 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms