RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TLE6Q9H808 572 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 SP110Q9HB58 689 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ZC4H2Q9NQZ6 224 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 OXSMQ9NWU1 459 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 UCKL1Q9NWZ5 548 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 FBXO10Q9UK96 956 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CPSF3Q9UKF6 684 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA9Q9Y5G4 932 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA7Q9Y5G6 932 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA6Q9Y5G7 932 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA2Q9Y5H1 932 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 MAD1L1Q9Y6D9 718 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 FRMPD2Q68DX3 1309 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 CNTNAP4Q9C0A0 1308 aa6.11□□□□□ -1.43
ECHDC1-215ENST00000475319 ATRNO75882 1429 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 PRAG1Q86YV5 1406 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 A0A0G2JPF8 293 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 SMIM23A6NLE4 172 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HNRNPCL3B7ZW38 293 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 PSMD11O00231 422 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CCRL2O00421 344 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TOR1BO14657 336 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC7A4O43246 635 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HOXC11O43248 304 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 USP2O75604 605 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 BMP10O95393 424 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 IL33O95760 270 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GUCA1CO95843 209 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CLPTM1O96005 669 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 IGLV1-40P01703 118 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HEXBP07686 556 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HNRNPCL4P0DMR1 293 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 ICAM2P13598 275 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HLA-FP30511 346 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GUCY1A2P33402 732 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HTR7P34969 479 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TALDO1P37837 337 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GP5P40197 560 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CD86P42081 329 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CDK9P50750 372 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CHN2P52757 468 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 POLGP54098 1239 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 EEF1A1P68104 462 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 IFITM2Q01629 132 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GHRHRQ02643 423 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 EEF1A2Q05639 463 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 RIPPLY1Q0D2K3 151 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TRPC3Q13507 836 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 FRG1Q14331 258 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 POU6F1Q14863 301 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TESK1Q15569 626 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 DUSP7Q16829 419 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CYP27C1Q4G0S4 372 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 RTP2Q5QGT7 225 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 EEF1A1P5Q5VTE0 462 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CACHD1Q5VU97 1274 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 KANK2Q63ZY3 851 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 PLEKHA7Q6IQ23 1121 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 OTOP3Q7RTS5 596 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 RALGPS2Q86X27 583 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GALNT13Q8IUC8 556 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CNGA4Q8IV77 575 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CCDC36Q8IYA8 594 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CLYBLQ8N0X4 340 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 FBXL6Q8N531 539 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CISD2Q8N5K1 135 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 SSH3Q8TE77 659 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 SCFD2Q8WU76 684 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 KBTBD7Q8WVZ9 684 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TOE1Q96GM8 510 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 PLEKHA8Q96JA3 519 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 MEGF10Q96KG7 1140 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 B3GALT6Q96L58 329 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF578Q96N58 590 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 FCRL3Q96P31 734 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 HEMGNQ9BXL5 484 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 CSRNP2Q9H175 543 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 LHX5Q9H2C1 402 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TRIM45Q9H8W5 580 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 LY9Q9HBG7 655 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GDF3Q9NR23 364 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC38A7Q9NVC3 462 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GPRC5DQ9NZD1 345 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 IGSF9Q9P2J2 1179 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 RNF14Q9UBS8 474 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 FBXO40Q9UH90 709 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TUBE1Q9UJT0 475 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 BAG5Q9UL15 447 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 GTF2A1LQ9UNN4 478 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 TNNQ9UQP3 1299 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 ERGIC3Q9Y282 383 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 DTX4Q9Y2E6 619 aa6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 WBP11Q9Y2W2 641 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-215ENST00000475319 KLF2Q9Y5W3 355 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms