RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 K7ENP7 123 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 K7ESM1 405 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 RNF225M0QZC1 329 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 KPNA3O00505 521 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 P4HA2O15460 535 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 SLC28A2O43868 658 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 BNIP3LO60238 219 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 CLDN11O75508 207 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 ZNF202O95125 648 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 PRNPP04156 253 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 GIMD1P0DJR0 217 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 PRLRP16471 622 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 PRCPP42785 496 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 TAS2R38P59533 333 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 CDK17Q00537 523 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 LY6DQ14210 128 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 ZNF284Q2VY69 593 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 C3orf38Q5JPI3 329 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 INO80CQ6PI98 192 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 ARL14Q8N4G2 192 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 OR13H1Q8NG92 308 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 WDR48Q8TAF3 677 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 C2orf49Q9BVC5 232 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
SKA3-206ENST00000475251 MUC3BQ9H195 1237 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 OSBPL2Q9H1P3 480 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 DNAJC28Q9NX36 388 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 SATB2Q9UPW6 733 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 PCDHGA8Q9Y5G5 932 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 HS3ST3A1Q9Y663 406 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 CSNK1G3Q9Y6M4 447 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 COL6A6A6NMZ7 2263 aa12.92□□□□□ -0.34
SKA3-206ENST00000475251 MGAQ8IWI9 3026 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 TCEA3O75764 348 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 PCDH8O95206 1070 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 WISP1O95388 367 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 GLI1P08151 1106 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 CHRNA3P32297 505 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 RECQLP46063 649 aaPredicted RBP12.91□□□□□ -0.34
SKA3-206ENST00000475251 NUMBP49757 651 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
SKA3-206ENST00000475251 STIM1Q13586 685 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 PKP1Q13835 747 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 FBXL22Q6P050 247 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 CCDC81Q6ZN84 652 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 RBM44Q6ZP01 1051 aaKnown RBP12.91□□□□□ -0.34
SKA3-206ENST00000475251 Q6ZSR6 202 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
SKA3-206ENST00000475251 PTAR1Q7Z6K3 402 aaPredicted RBP12.91□□□□□ -0.34
SKA3-206ENST00000475251 TMEM110Q86TL2 294 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 PARGQ86W56 976 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 SLC22A18ASQ8N1D0 253 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ATP11CQ8NB49 1132 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 KLK6Q92876 244 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ALG14Q96F25 216 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 SLC46A1Q96NT5 459 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 SLC4A5Q9BY07 1137 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 SEMA4CQ9C0C4 833 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 DDIT4Q9NX09 232 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 CFAP46Q8IYW2 2715 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 ATMQ13315 3056 aa12.91□□□□□ -0.34
SKA3-206ENST00000475251 TENM4Q6N022 2769 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 E5RJQ4 531 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 ARHGAP6O43182 974 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 SMC2O95347 1197 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 CSF2P04141 144 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 SRCP12931 536 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 KRT5P13647 590 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 NME1P15531 152 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 RPIAP49247 311 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 CDH4P55283 916 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 RPS21P63220 83 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 CENPCQ03188 943 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 KYAT3Q6YP21 454 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 GCNT7Q6ZNI0 430 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 RRAGAQ7L523 313 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 ZNF548Q8NEK5 533 aaPredicted RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 WDR36Q8NI36 951 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 GLMNQ92990 594 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 CEP63Q96MT8 703 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 FZD3Q9NPG1 666 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
SKA3-206ENST00000475251 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
SKA3-206ENST00000475251 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms