RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 NUCB2P80303 420 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 SKOR1P84550 965 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 FKBP3Q00688 224 aaKnown RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 SRSF6Q13247 344 aaKnown RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 SLC12A1Q13621 1099 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 FZD2Q14332 565 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ALFQ53S48 1182 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 OTUD1Q5VV17 481 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 FAM46CQ5VWP2 391 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ISM2Q6H9L7 571 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 Q6ZSR6 202 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ABI3BPQ7Z7G0 1075 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TMEM110Q86TL2 294 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 HORMAD1Q86X24 394 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 DEFB106AQ8N104 65 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 EXD3Q8N9H8 876 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 IFI44Q8TCB0 444 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 SNRNP27Q8WVK2 155 aaKnown RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 WBP1Q96G27 269 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 DEPDC7Q96QD5 511 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TNKS2Q9H2K2 1166 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 PREBQ9HCU5 417 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TMPRSS4Q9NRS4 437 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 DNAJC28Q9NX36 388 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TPX2Q9ULW0 747 aaKnown RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ENTPD2Q9Y5L3 495 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 HS3ST4Q9Y661 456 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TRPM6Q9BX84 2022 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 CPED1A4D0V7 1026 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 TCAF2A6NFQ2 919 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 KPNA3O00505 521 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 SCAMP1O15126 338 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 MAGEC1O60732 1142 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF821O75541 412 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 CHRNA3P32297 505 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 APBA1Q02410 837 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 SULT2A1Q06520 285 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 TMEM259Q4ZIN3 620 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 BEND5Q7L4P6 421 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 SLC46A1Q96NT5 459 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 RPRD1AQ96P16 312 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 TCEAL2Q9H3H9 227 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 CLMPQ9H6B4 373 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 METTL14Q9HCE5 456 aaKnown RBP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAF4-209ENST00000473421 DDIT4Q9NX09 232 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 NLGN3Q9NZ94 848 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 CNTN6Q9UQ52 1028 aa12.93□□□□□ -0.34
TRAF4-209ENST00000473421 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 FAM170AA1A519 330 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 C1QTNF3-AMACRE9PGA6 284 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 K7ENP7 123 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ALOX15BO15296 676 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 PAGE1O75459 146 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-209ENST00000473421 PCDH8O95206 1070 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 PAK4O96013 591 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-209ENST00000473421 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
TRAF4-209ENST00000473421 NUDT1P36639 197 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 PDX1P52945 283 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 STILQ15468 1287 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 DEFB133Q30KQ1 61 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 BROXQ5VW32 411 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 INO80CQ6PI98 192 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-209ENST00000473421 FOXR1Q6PIV2 292 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 DSG4Q86SJ6 1040 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF683Q8IZ20 524 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ATP6V0D2Q8N8Y2 350 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF548Q8NEK5 533 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-209ENST00000473421 GRIN3AQ8TCU5 1115 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF606Q8WXB4 792 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 SLC2A13Q96QE2 648 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 CPXM1Q96SM3 734 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 TRIM4Q9C037 500 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ABCG4Q9H172 646 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 THAP9Q9H5L6 903 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 VPS51Q9UID3 782 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 SLC25A13Q9UJS0 675 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 TBC1D30Q9Y2I9 924 aa12.92□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 BECN2A8MW95 431 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms