RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 LNP1A1A4G5 178 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 MEI4A8MW99 385 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
CALD1-215ENST00000472096 RNASEH1O60930 286 aaKnown RBP15.42■□□□□ 0.06
CALD1-215ENST00000472096 FAM228BP0C875 321 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 SRCP12931 536 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 L1CAMP32004 1257 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 ACSL1P33121 698 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 PSMD8P48556 350 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 GNA12Q03113 381 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 SEMA3BQ13214 749 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 Q6ZVU0 165 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 USP30Q70CQ3 517 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 MMAAQ8IVH4 418 aaKnown RBP15.42■□□□□ 0.06
CALD1-215ENST00000472096 CADM4Q8NFZ8 388 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 FOXJ1Q92949 421 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 FAM129BQ96TA1 746 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 DNAJC7Q99615 494 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 EDEM2Q9BV94 578 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 RETREG1Q9H6L5 497 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 ATP13A1Q9HD20 1204 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 MRPL47Q9HD33 250 aaKnown RBP15.42■□□□□ 0.06
CALD1-215ENST00000472096 NDFIP2Q9NV92 336 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 NENFQ9UMX5 172 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 DOCK9Q9BZ29 2069 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 TMEM131Q92545 1883 aa15.42■□□□□ 0.06
CALD1-215ENST00000472096 MID1O15344 667 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 ZMPSTE24O75844 475 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 ADH1BP00325 375 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 MT-CO1P00395 513 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 SDHBP21912 280 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 GLDCP23378 1020 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 LIMK1P53667 647 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 DLG2Q15700 870 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 TRIM61Q5EBN2 209 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 LINGO4Q6UY18 593 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 ARFGAP1Q8N6T3 406 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 RTL3Q8N8U3 475 aaKnown RBP15.41■□□□□ 0.06
CALD1-215ENST00000472096 OR8D1Q8WZ84 308 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 PEBP4Q96S96 227 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 BTBD1Q9H0C5 482 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 THAP2Q9H0W7 228 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 PCED1AQ9H1Q7 454 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 GPATCH2LQ9NWQ4 482 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 SERGEFQ9UGK8 458 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
CALD1-215ENST00000472096 ASCC3Q8N3C0 2202 aaKnown RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 A0A1W2PP55 124 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 K7ERQ8 282 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 CBX4O00257 560 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SLC30A4O14863 429 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ALOX15BO15296 676 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 CREB3O43889 395 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 MFAP3LO75121 409 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SEMA4FO95754 770 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 EPHB2P29323 1055 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SLC8A1P32418 973 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ACVRL1P37023 503 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ETFBP38117 255 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ARF5P84085 180 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 PUM1Q14671 1186 aaKnown RBP eCLIP15.4■□□□□ 0.06
CALD1-215ENST00000472096 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 WDR45BQ5MNZ6 344 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SYCP2LQ5T4T6 812 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 DCAF12L1Q5VU92 463 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 RETSATQ6NUM9 610 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ALKBH5Q6P6C2 394 aaKnown RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 SLC23A3Q6PIS1 610 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SARM1Q6SZW1 724 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 CYP4V2Q6ZWL3 525 aaPredicted RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 RABEPKQ7Z6M1 372 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 RGL4Q8IZJ4 473 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ATP11CQ8NB49 1132 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 RTKNQ9BST9 563 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SPON2Q9BUD6 331 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 SNRNP25Q9BV90 132 aaKnown RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 ACE2Q9BYF1 805 aaPredicted RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 C6orf106Q9H6K1 298 aaPredicted RBP15.4■□□□□ 0.06
CALD1-215ENST00000472096 SGK2Q9HBY8 427 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 FBXL12Q9NXK8 326 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 AP4E1Q9UPM8 1137 aa15.4■□□□□ 0.06
CALD1-215ENST00000472096 ANKRD36A6QL64 1941 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 METTL12A8MUP2 240 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 SMAD6O43541 496 aaKnown RBP15.39■□□□□ 0.05
CALD1-215ENST00000472096 RAMP2O60895 175 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 LRCH4O75427 683 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 RNF8O76064 485 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 IL1BP01584 269 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 CFIP05156 583 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 TPM1P09493 284 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 C5AR1P21730 350 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 MIPP30301 263 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
CALD1-215ENST00000472096 SERPINH1P50454 418 aaKnown RBP15.39■□□□□ 0.05
CALD1-215ENST00000472096 TPI1P60174 286 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 IRX4P78413 519 aa15.39■□□□□ 0.05
CALD1-215ENST00000472096 SFSWAPQ12872 951 aaKnown RBP15.39■□□□□ 0.05
CALD1-215ENST00000472096 CA9Q16790 459 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms