RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 VWA3BQ502W6 1294 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 SETMARQ53H47 684 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-207ENST00000467819 MIIPQ5JXC2 388 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 TAF3Q5VWG9 929 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 SMYD5Q6GMV2 418 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 TFAP2DQ7Z6R9 452 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 IQCHQ86VS3 1027 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 KLK6Q92876 244 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 C2orf49Q9BVC5 232 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-207ENST00000467819 PREBQ9HCU5 417 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 MPP6Q9NZW5 540 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 FHOD1Q9Y613 1164 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 LOC400499M0QZD8 3231 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 KPNA3O00505 521 aaPredicted RBP21.58■■□□□ 1.05
COL9A3-207ENST00000467819 MAGEC1O60732 1142 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 RNGTTO60942 597 aaKnown RBP21.58■■□□□ 1.05
COL9A3-207ENST00000467819 JUPP14923 745 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 HNF1BP35680 557 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 C2CD6Q53TS8 623 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 PIP5KL1Q5T9C9 394 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 DPY19L2P1Q6NXN4 242 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 LRRC31Q6UY01 552 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 LINGO4Q6UY18 593 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 ZNF683Q8IZ20 524 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 C18orf8Q96DM3 657 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 CCDC114Q96M63 670 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 TUBGCP2Q9BSJ2 902 aa21.58■■□□□ 1.05
COL9A3-207ENST00000467819 A0A0D9SEW6 157 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 PRAMEF26H0Y7S4 382 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 GOLGA8SH3BPF8 625 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 SLC31A1O15431 190 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 SMAD6O43541 496 aaKnown RBP21.57■■□□□ 1.04
COL9A3-207ENST00000467819 SDC3O75056 442 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 F9P00740 461 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 CYP11B1P15538 503 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 PRLRP16471 622 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 CHRNA3P32297 505 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 CDH5P33151 784 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-207ENST00000467819 DPCR1Q3MIW9 517 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 SLC25A52Q3SY17 297 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 SFMBT2Q5VUG0 894 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 KANSL1Q7Z3B3 1105 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 ERICH1Q86X53 443 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 XYLT1Q86Y38 959 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 DCAF4L2Q8NA75 395 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 OR2A12Q8NGT7 310 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 NT5C3BQ969T7 300 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 ARRDC3Q96B67 414 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 PGAP3Q96FM1 320 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-207ENST00000467819 PAXBP1Q9Y5B6 917 aa21.57■■□□□ 1.04
COL9A3-207ENST00000467819 A0A1W2PQU0 124 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 E9PAM4 449 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 C1SP09871 688 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 GLDCP23378 1020 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 FLT3P36888 993 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 GABRB2P47870 512 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 KCNMA1Q12791 1236 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 OVGP1Q12889 678 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 HES3Q5TGS1 186 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 SETD3Q86TU7 594 aaPredicted RBP21.56■■□□□ 1.04
COL9A3-207ENST00000467819 CHST14Q8NCH0 376 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 OR7D4Q8NG98 312 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 GRIN3AQ8TCU5 1115 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 TSC1Q92574 1164 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 KLHDC7BQ96G42 594 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 LRIG1Q96JA1 1093 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 TNKS2Q9H2K2 1166 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 CLSTN2Q9H4D0 955 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 FZD3Q9NPG1 666 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 DYRK4Q9NR20 520 aa21.56■■□□□ 1.04
COL9A3-207ENST00000467819 DRGXA6NNA5 263 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 RNF103O00237 685 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 SRGAP2O75044 1071 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 ENDOD1O94919 500 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 OR1E1P30953 314 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 SCNN1AP37088 669 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 C6orf118Q5T5N4 469 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 KLHDC7AQ5VTJ3 777 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 TRNP1Q6NT89 227 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 C22orf39Q6P5X5 142 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 SPON2Q9BUD6 331 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 SCUBE2Q9NQ36 999 aa21.55■■□□□ 1.04
COL9A3-207ENST00000467819 PRNPP04156 253 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 THEGLP0DJG4 465 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 CDK4P11802 303 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 CLCN6P51797 869 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 ARSIQ5FYB1 569 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 NOP9Q86U38 636 aaKnown RBP21.54■■□□□ 1.04
COL9A3-207ENST00000467819 HORMAD1Q86X24 394 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 FAM131BQ86XD5 332 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 TMEM145Q8NBT3 493 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 TMIEQ8NEW7 156 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 NXPE2Q96DL1 559 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 C1orf74Q96LT6 269 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 CFAP57Q96MR6 1250 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 DCBLD2Q96PD2 775 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 IL36AQ9UHA7 158 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 CHD5Q8TDI0 1954 aa21.54■■□□□ 1.04
COL9A3-207ENST00000467819 SMG1Q96Q15 3661 aaKnown RBP21.53■■□□□ 1.04
COL9A3-207ENST00000467819 IGLV3-10A0A075B6K4 115 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms