RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 GPR27Q9NS67 375 aa12.09□□□□□ -0.47
CNOT4-208ENST00000465721 NLGN3Q9NZ94 848 aa12.09□□□□□ -0.47
CNOT4-208ENST00000465721 NBASA2RRP1 2371 aa12.08□□□□□ -0.47
CNOT4-208ENST00000465721 E5RJQ4 531 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 PYCARD-AS1I3L0S3 204 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 RNF103O00237 685 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 KLK10O43240 276 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF202O95125 648 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 C6P13671 934 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HNRNPA2B1P22626 353 aaKnown RBP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ACADSBP45954 432 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 OXCT1P55809 520 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 KRT85P78386 507 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 NUCB2P80303 420 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 GCNT1Q02742 428 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 VAC14Q08AM6 782 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 MEA1Q16626 185 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HS1BP3Q53T59 392 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 NEK5Q6P3R8 708 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 FAM181AQ8N9Y4 354 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ARRDC3Q96B67 414 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 KREMEN1Q96MU8 473 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 FEM1AQ9BSK4 669 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 DPH1Q9BZG8 443 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ZFR2Q9UPR6 939 aaKnown RBP12.08□□□□□ -0.48
CNOT4-208ENST00000465721 CNTN6Q9UQ52 1028 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 HS3ST2Q9Y278 367 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 ZDHHC9Q9Y397 364 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
CNOT4-208ENST00000465721 B8ZZF3 427 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 K7ESM1 405 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 SCAMP1O15126 338 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 NEBLO76041 1014 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 ALPPL2P10696 532 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 SRCP12931 536 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 AKT2P31751 481 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 GGCXP38435 758 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 CLDN2P57739 230 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 YWHAZP63104 245 aaKnown RBP12.07□□□□□ -0.48
CNOT4-208ENST00000465721 LRRC63Q05C16 580 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 TAF5Q15542 800 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 SEL1L3Q68CR1 1132 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 TMEM110Q86TL2 294 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF548Q8NEK5 533 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-208ENST00000465721 OR2A12Q8NGT7 310 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 IFI44Q8TCB0 444 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 RPRD1AQ96P16 312 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-208ENST00000465721 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 CLMPQ9H6B4 373 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 FAM204AQ9H8W3 233 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 USP29Q9HBJ7 922 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
CNOT4-208ENST00000465721 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 VPS28Q9UK41 221 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 ARHGEF17Q96PE2 2063 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-208ENST00000465721 ANKRD36A6QL64 1941 aa12.07□□□□□ -0.48
CNOT4-208ENST00000465721 PMS2P1A4D2B8 440 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 A6NNZ2 444 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 KPNA3O00505 521 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-208ENST00000465721 BNIP3LO60238 219 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 MT-CO1P00395 513 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF18P17022 549 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 TGM2P21980 687 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 PDCLQ13371 301 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF542PQ5EBM4 170 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 C3orf38Q5JPI3 329 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 OR6B2Q6IFH4 312 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 KYAT3Q6YP21 454 aaKnown RBP12.06□□□□□ -0.48
CNOT4-208ENST00000465721 PTAR1Q7Z6K3 402 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-208ENST00000465721 CHST14Q8NCH0 376 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 MAPK15Q8TD08 544 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 MED8Q96G25 268 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 PRR11Q96HE9 360 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-208ENST00000465721 SLC2A13Q96QE2 648 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 PSMB7Q99436 277 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 DDIT4Q9NX09 232 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 DNAJC28Q9NX36 388 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 VANGL2Q9ULK5 521 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 TBC1D30Q9Y2I9 924 aa12.06□□□□□ -0.48
CNOT4-208ENST00000465721 SYNJ2BP-COX16A0A087WUM0 186 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 NEMP2A6NFY4 417 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 K7ENP7 123 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 K7ERQ8 282 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 P4HA2O15460 535 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms