RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 K7ENP7 123 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 K7ESM1 405 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 ZNF202O95125 648 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 CTSLP07711 333 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 SLC2A3P11169 496 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 MYF5P13349 255 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 HNRNPKP61978 463 aaKnown RBP eCLIP11.13□□□□□ -0.63
CBX3-205ENST00000462165 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 PITX1P78337 314 aaPredicted RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 KRT85P78386 507 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 GCNT1Q02742 428 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 KCNC4Q03721 635 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 MEA1Q16626 185 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 INO80CQ6PI98 192 aaPredicted RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 DCP2Q8IU60 420 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 OR52K2Q8NGK3 314 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 MAPK15Q8TD08 544 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 MED8Q96G25 268 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 SLC46A1Q96NT5 459 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 MED15Q96RN5 788 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 OSBPL2Q9H1P3 480 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 GOLPH3LQ9H4A5 285 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 THAP9Q9H5L6 903 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 METTL14Q9HCE5 456 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 GPR27Q9NS67 375 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 VPS28Q9UK41 221 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 ZFR2Q9UPR6 939 aaKnown RBP11.13□□□□□ -0.63
CBX3-205ENST00000462165 SATB2Q9UPW6 733 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 HS3ST2Q9Y278 367 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 OR51B4Q9Y5P0 310 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 RP1P56715 2156 aa11.13□□□□□ -0.63
CBX3-205ENST00000462165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 A0A1W2PNU3 283 aaPredicted RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 TRIM49BA6NDI0 452 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 A6NNZ2 444 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 E5RJQ4 531 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 P4HA2O15460 535 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 BNIP3LO60238 219 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 SRCP12931 536 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 TGM2P21980 687 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 RBMS1P29558 406 aaKnown RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 CCR1P32246 355 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CHRNA3P32297 505 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CLDN2P57739 230 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CENPCQ03188 943 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 LRRC63Q05C16 580 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 ZNF177Q13360 481 aaPredicted RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 PNOCQ13519 176 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 AUHQ13825 339 aaKnown RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 TMEM259Q4ZIN3 620 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 C3orf38Q5JPI3 329 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 ZCCHC8Q6NZY4 707 aaKnown RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 RNF34Q969K3 372 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 ARRDC3Q96B67 414 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 PRR11Q96HE9 360 aaPredicted RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 BMFQ96LC9 184 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
CBX3-205ENST00000462165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.12□□□□□ -0.63
CBX3-205ENST00000462165 DNAJC28Q9NX36 388 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 PCDHGA8Q9Y5G5 932 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 ENTPD2Q9Y5L3 495 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 HS3ST3A1Q9Y663 406 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 CSNK1G3Q9Y6M4 447 aa11.12□□□□□ -0.63
CBX3-205ENST00000462165 DOCK4Q8N1I0 1966 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
CBX3-205ENST00000462165 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 KPNA3O00505 521 aaPredicted RBP11.11□□□□□ -0.63
CBX3-205ENST00000462165 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 SLC28A2O43868 658 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 CLDN11O75508 207 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 NEBLO76041 1014 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 PCDH8O95206 1070 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 WISP1O95388 367 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 MT-CO1P00395 513 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 CSF2P04141 144 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 PRNPP04156 253 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 GLI1P08151 1106 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 IRAK1P51617 712 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 CDH4P55283 916 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 KRT83P78385 493 aa11.11□□□□□ -0.63
CBX3-205ENST00000462165 CDK17Q00537 523 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms