RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CLEC16AQ2KHT3 1053 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 ZNF783Q6ZMS7 281 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 PHF13Q86YI8 300 aaPredicted RBP19.4■□□□□ 0.7
VARS-220ENST00000461874 CHCHD4Q8N4Q1 142 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 OR7D4Q8NG98 312 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 JOSD2Q8TAC2 188 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 BAHD1Q8TBE0 780 aaPredicted RBP19.4■□□□□ 0.7
VARS-220ENST00000461874 RHBDD1Q8TEB9 315 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 GATA6Q92908 595 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 ADAM22Q9P0K1 906 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 KLK13Q9UKR3 277 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 MSRB2Q9Y3D2 182 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 A0A1W2PR77 199 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 FAM221BA6H8Z2 402 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 WNT9AO14904 365 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 SMAD6O43541 496 aaKnown RBP19.39■□□□□ 0.69
VARS-220ENST00000461874 PCDHGA12O60330 932 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 DFNA5O60443 496 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CTSLP07711 333 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 KRT3P12035 628 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 ATP1A3P13637 1013 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CD38P28907 300 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CCT8P50990 548 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 GSCP56915 257 aaPredicted RBP19.39■□□□□ 0.69
VARS-220ENST00000461874 NRG1Q02297 640 aaPredicted RBP19.39■□□□□ 0.69
VARS-220ENST00000461874 CDO1Q16878 200 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 ARL13BQ3SXY8 428 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 POM121L1PQ3SYA9 428 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 AGBL4Q5VU57 503 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 LINGO4Q6UY18 593 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 STRADAQ7RTN6 431 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 AOPEPQ8N6M6 819 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 OR2A12Q8NGT7 310 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 ADAMTS14Q8WXS8 1223 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CENPIQ92674 756 aaPredicted RBP19.39■□□□□ 0.69
VARS-220ENST00000461874 SKA1Q96BD8 255 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 SERAC1Q96JX3 654 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CCDC114Q96M63 670 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 CDC6Q99741 560 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 SPON2Q9BUD6 331 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 AASDHPPTQ9NRN7 309 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 TMEM63CQ9P1W3 806 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 OR12D3Q9UGF7 316 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 BTBD3Q9Y2F9 522 aa19.39■□□□□ 0.69
VARS-220ENST00000461874 FARP1Q9Y4F1 1045 aaPredicted RBP19.39■□□□□ 0.69
VARS-220ENST00000461874 ZMPSTE24O75844 475 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 CALB1P05937 261 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 GLDCP23378 1020 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 CHRNA3P32297 505 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 RFC1P35251 1148 aaPredicted RBP19.38■□□□□ 0.69
VARS-220ENST00000461874 MANEALQ5VSG8 457 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 PRPF39Q86UA1 669 aaKnown RBP19.38■□□□□ 0.69
VARS-220ENST00000461874 SLCO6A1Q86UG4 719 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 ASPMQ8IZT6 3477 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 PNPLA1Q8N8W4 532 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 TMIEQ8NEW7 156 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 AGPAT1Q99943 283 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 OSBPL2Q9H1P3 480 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 ARHGAP20Q9P2F6 1191 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 APOBEC2Q9Y235 224 aaKnown RBP19.38■□□□□ 0.69
VARS-220ENST00000461874 SPEGQ15772 3267 aa19.38■□□□□ 0.69
VARS-220ENST00000461874 A0A1B0GTQ1 180 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 CBX4O00257 560 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 NUDT1P36639 197 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 HDAC4P56524 1084 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 GNA12Q03113 381 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 SLC20A2Q08357 652 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 RETSATQ6NUM9 610 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 C22orf39Q6P5X5 142 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 TRIM69Q86WT6 500 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 DRC7Q8IY82 874 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 KDF1Q8NAX2 398 aaPredicted RBP19.37■□□□□ 0.69
VARS-220ENST00000461874 C3orf20Q8ND61 904 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 FAM172AQ8WUF8 416 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 ELF4Q99607 663 aaPredicted RBP19.37■□□□□ 0.69
VARS-220ENST00000461874 SELENOOQ9BVL4 669 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 NAT10Q9H0A0 1025 aaKnown RBP19.37■□□□□ 0.69
VARS-220ENST00000461874 RETREG1Q9H6L5 497 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 ATP13A1Q9HD20 1204 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 AKAP13Q12802 2813 aa19.37■□□□□ 0.69
VARS-220ENST00000461874 SIGLEC16A6NMB1 481 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 FAM72CH0Y354 149 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 ZNF821O75541 412 aaPredicted RBP19.36■□□□□ 0.69
VARS-220ENST00000461874 PRNPP04156 253 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 GRK6P43250 576 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 TAS2R38P59533 333 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
VARS-220ENST00000461874 ANO6Q4KMQ2 910 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 PRAMEF14Q5SWL7 426 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 PIP5KL1Q5T9C9 394 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 FAM72AQ5TYM5 149 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 NAPEPLDQ6IQ20 393 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 FAM72DQ6L9T8 149 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 WDR59Q6PJI9 974 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 MON1BQ7L1V2 547 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 NLRP14Q86W24 1093 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 FAM72BQ86X60 149 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 CHST14Q8NCH0 376 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 MAGEB5Q9BZ81 275 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 CEP44Q9C0F1 390 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms