RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 SERGEFQ9UGK8 458 aa23.01■■□□□ 1.27
TRAF4-207ENST00000461195 FZD4Q9ULV1 537 aa23.01■■□□□ 1.27
TRAF4-207ENST00000461195 FARP1Q9Y4F1 1045 aaPredicted RBP23.01■■□□□ 1.27
TRAF4-207ENST00000461195 ADAMTS9Q9P2N4 1935 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 K7ERQ8 282 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 MCF2LO15068 1137 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 CREB3O43889 395 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 BNIP3LO60238 219 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 ZMPSTE24O75844 475 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 ENGP17813 658 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 EPHB2P29323 1055 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 SLC20A2Q08357 652 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 ZNF252P-AS1Q0IIN9 211 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 FAM46CQ5VWP2 391 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 HDDC3Q8N4P3 179 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 AADATQ8N5Z0 425 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 ACE2Q9BYF1 805 aaPredicted RBP23■■□□□ 1.27
TRAF4-207ENST00000461195 TRIM7Q9C029 511 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 MIR1-1HGQ9H1L0 117 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 MAGEH1Q9H213 219 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 NEUROG2Q9H2A3 272 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 ARHGAP20Q9P2F6 1191 aa23■■□□□ 1.27
TRAF4-207ENST00000461195 KMT2BQ9UMN6 2715 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 A0A087X0T9 212 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 A0A1B0GTW7 788 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 C4orf47A7E2U8 309 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 C1QTNF3-AMACRE9PGA6 284 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 CDX4O14627 284 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 SMAD6O43541 496 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 RAMP2O60895 175 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 FAM228BP0C875 321 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 GOT1P17174 413 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 HNRNPH3P31942 346 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 ACVRL1P37023 503 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 SERPINH1P50454 418 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 SEMA3BQ13214 749 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 RTL3Q8N8U3 475 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 SNX19Q92543 992 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 ARHGEF2Q92974 986 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 NCAPGQ9BPX3 1015 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 CATSPERBQ9H7T0 1116 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 EIF2B4Q9UI10 523 aaKnown RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 PPM1HQ9ULR3 514 aa22.99■■□□□ 1.27
TRAF4-207ENST00000461195 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-207ENST00000461195 PCDH15Q96QU1 1955 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 CXorf51AA0A1B0GTR3 108 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 SYPP08247 313 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 TPM1P09493 284 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 HTR7P34969 479 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 ARF5P84085 180 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 POLD3Q15054 466 aaPredicted RBP22.98■■□□□ 1.27
TRAF4-207ENST00000461195 DAB2IPQ5VWQ8 1189 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 C22orf39Q6P5X5 142 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 VSTM4Q8IW00 320 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 ZCCHC9Q8N567 271 aaKnown RBP22.98■■□□□ 1.27
TRAF4-207ENST00000461195 ARFGAP1Q8N6T3 406 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 OR2A12Q8NGT7 310 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 BIRC7Q96CA5 298 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 CEP44Q9C0F1 390 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 FSCN3Q9NQT6 498 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 PCSK1NQ9UHG2 260 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 SARDHQ9UL12 918 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 HPCAL4Q9UM19 191 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 AP4E1Q9UPM8 1137 aa22.98■■□□□ 1.27
TRAF4-207ENST00000461195 CHD8Q9HCK8 2581 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 FAM47DPA6NHR8 397 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 LRRC72A6NJI9 287 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 EIF3CLB5ME19 914 aaKnown RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 ARHGAP33O14559 1287 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 TM4SF5O14894 197 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 BCAT2O15382 392 aaPredicted RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 FGF10O15520 208 aaPredicted RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 PRPSAP2O60256 369 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 KRT37O76014 449 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 FSBPO95073 299 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 MIPP30301 263 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 DRD3P35462 400 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 MAPK8P45983 427 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 ATXN3P54252 364 aaPredicted RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 GALCP54803 685 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 GEMIN4P57678 1058 aaKnown RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 ERMARDQ5T6L9 678 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 KIAA0895LQ68EN5 471 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 ALKBH5Q6P6C2 394 aaKnown RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 NCEH1Q6PIU2 408 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 OR8K1Q8NGG5 319 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 OR2T34Q8NGX1 318 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 PIP4K2CQ8TBX8 421 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 EIF3CQ99613 913 aaKnown RBP22.97■■□□□ 1.27
TRAF4-207ENST00000461195 THAP2Q9H0W7 228 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 GPATCH2LQ9NWQ4 482 aa22.97■■□□□ 1.27
TRAF4-207ENST00000461195 WASH4PA8MWX3 477 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 CHRNA3P32297 505 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 RECQLP46063 649 aaPredicted RBP22.96■■□□□ 1.27
TRAF4-207ENST00000461195 METAP1P53582 386 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 ADPRHP54922 357 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 TPI1P60174 286 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 ACAP1Q15027 740 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 CCDC122Q5T0U0 273 aa22.96■■□□□ 1.27
TRAF4-207ENST00000461195 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms