RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 RBM44Q6ZP01 1051 aaKnown RBP12.17□□□□□ -0.46
HCFC1-204ENST00000461098 BEND5Q7L4P6 421 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 EFL1Q7Z2Z2 1120 aaKnown RBP12.17□□□□□ -0.46
HCFC1-204ENST00000461098 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
HCFC1-204ENST00000461098 SH2D3CQ8N5H7 860 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 BTN2A3PQ96KV6 586 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 FEM1AQ9BSK4 669 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 ATXN7L1Q9ULK2 861 aaPredicted RBP12.17□□□□□ -0.46
HCFC1-204ENST00000461098 HPSEQ9Y251 543 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
HCFC1-204ENST00000461098 CSNK1G3Q9Y6M4 447 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
HCFC1-204ENST00000461098 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 SPTY2D1-AS1A0A0U1RR47 76 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 KCNU1A8MYU2 1149 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 M0QYV0 167 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 RAD51BO15315 384 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 TCEA3O75764 348 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 MT-CO1P00395 513 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 PAEPP09466 180 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 BRD2P25440 801 aaKnown RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 AKT2P31751 481 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 DPYDQ12882 1025 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 TGIF1Q15583 401 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 FOXD4L5Q5VV16 416 aaPredicted RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 FBXL22Q6P050 247 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 ATG14Q6ZNE5 492 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 DCP2Q8IU60 420 aaKnown RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 OR2A12Q8NGT7 310 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 WDR36Q8NI36 951 aaKnown RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 FOXD4L4Q8WXT5 416 aaPredicted RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 EXTL1Q92935 676 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 SALL4Q9UJQ4 1053 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 PNMA8BQ9ULN7 279 aaPredicted RBP12.16□□□□□ -0.46
HCFC1-204ENST00000461098 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
HCFC1-204ENST00000461098 TRPM6Q9BX84 2022 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 TCAF2A6NFQ2 919 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 A6NNZ2 444 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 F5H5T6 163 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 SPINT1O43278 529 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 AQP9O43315 295 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 STX10O60499 249 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 APOEP02649 317 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 SRCP12931 536 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 PFKFB1P16118 471 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 ZNF18P17022 549 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 CHRNA3P32297 505 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 GPD2P43304 727 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 CENPCQ03188 943 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 LRMPQ12912 555 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 DEFB133Q30KQ1 61 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 XKR5Q6UX68 686 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
HCFC1-204ENST00000461098 TMIEQ8NEW7 156 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 TPCN2Q8NHX9 752 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 FAM174AQ8TBP5 190 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 KAT5Q92993 513 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 PSMB7Q99436 277 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
HCFC1-204ENST00000461098 BOCQ9BWV1 1114 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 UPF2Q9HAU5 1272 aaKnown RBP12.15□□□□□ -0.46
HCFC1-204ENST00000461098 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 HS3ST2Q9Y278 367 aa12.15□□□□□ -0.46
HCFC1-204ENST00000461098 LRRK2Q5S007 2527 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SCN8AQ9UQD0 1980 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 CCDC187A0A096LP49 1063 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 K7ERQ8 282 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 TPP1O14773 563 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 BNIP3LO60238 219 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 GCATO75600 419 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 TRUB2O95900 331 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 ITGB2P05107 769 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 FAM87AP0C7U9 286 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SLC5A2P31639 672 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 ERN2Q76MJ5 926 aaKnown RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 PTAR1Q7Z6K3 402 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-204ENST00000461098 PARGQ86W56 976 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SLC35F3Q8IY50 421 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 CHST14Q8NCH0 376 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 FAM149B1Q96BN6 582 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SGF29Q96ES7 293 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 SEMA3CQ99985 751 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms