RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SLC14A1Q13336 389 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 TEAD4Q15561 434 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 EFHC2Q5JST6 749 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 PLEKHA7Q6IQ23 1121 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 SCYL2Q6P3W7 929 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 IL27RAQ6UWB1 636 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 LINGO4Q6UY18 593 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 NLRP14Q86W24 1093 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 OR14C36Q8NHC7 312 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM131CQ96AQ9 280 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 IQCDQ96DY2 449 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 SLC32A1Q9H598 525 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 TMEM248Q9NWD8 314 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 SARDHQ9UL12 918 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 TPX2Q9ULW0 747 aaKnown RBP16.49■□□□□ 0.23
COL7A1-203ENST00000459756 K7ERQ8 282 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 GJB3O75712 270 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 ZMPSTE24O75844 475 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 CER1O95813 267 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 FTLP02792 175 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-203ENST00000459756 GLDCP23378 1020 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 DRD3P35462 400 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 GRIA4P48058 902 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 CCR5P51681 352 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-203ENST00000459756 TMC6Q7Z403 805 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 PIP4P1Q86T03 277 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 OR2A12Q8NGT7 310 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 OR2I1PQ8NGU4 316 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 PIP4K2CQ8TBX8 421 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-203ENST00000459756 ORAI3Q9BRQ5 295 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 ACE2Q9BYF1 805 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-203ENST00000459756 CEP44Q9C0F1 390 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 MAGEH1Q9H213 219 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 TM9SF3Q9HD45 589 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 NEU3Q9UQ49 428 aa16.48■□□□□ 0.23
COL7A1-203ENST00000459756 BZW2Q9Y6E2 419 aaKnown RBP16.48■□□□□ 0.23
COL7A1-203ENST00000459756 A0A1W2PPC4 97 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 C10orf142B7Z368 130 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 DDX3XO00571 662 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 SMAD6O43541 496 aaKnown RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 BNIP3LO60238 219 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 RTN2O75298 545 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 SKILP12757 684 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 CHRNA3P32297 505 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 RECQLP46063 649 aaPredicted RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 CSNK1EP49674 416 aaKnown RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 METAP1P53582 386 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 OGDHQ02218 1023 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 C22orf39Q6P5X5 142 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.47■□□□□ 0.23
COL7A1-203ENST00000459756 DEFB124Q8NES8 71 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 TMIEQ8NEW7 156 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 EPAS1Q99814 870 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 DNAI1Q9UI46 699 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 FZD10Q9ULW2 581 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 HPCAL4Q9UM19 191 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 SLCO1B1Q9Y6L6 691 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 CHD5Q8TDI0 1954 aa16.47■□□□□ 0.23
COL7A1-203ENST00000459756 A0A1B0GVT2 93 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 TMEM191CA6NGB0 347 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 GIPC1O14908 333 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-203ENST00000459756 RAMP2O60895 175 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 PRNPP04156 253 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 ZNF883P0CG24 379 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 MYBL1P10243 752 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 CD59P13987 128 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 PSMA2P25787 234 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 EPHB2P29323 1055 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
COL7A1-203ENST00000459756 ARF5P84085 180 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 BNC1Q01954 994 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 CCDC15Q0P6D6 951 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 CNTN1Q12860 1018 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 PYROXD2Q8N2H3 581 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 PCDH20Q8N6Y1 951 aaKnown RBP16.46■□□□□ 0.23
COL7A1-203ENST00000459756 ARHGEF2Q92974 986 aaKnown RBP16.46■□□□□ 0.23
COL7A1-203ENST00000459756 GAREM1Q9H706 876 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 NDFIP2Q9NV92 336 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 CNOT8Q9UFF9 292 aaKnown RBP16.46■□□□□ 0.23
COL7A1-203ENST00000459756 CAPN11Q9UMQ6 739 aa16.46■□□□□ 0.23
COL7A1-203ENST00000459756 TBC1D3DA0A087WVF3 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3IA0A087WXS9 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3EA0A087X179 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3KA0A087X1G2 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3FA6NER0 549 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-203ENST00000459756 TBC1D3LB9A6J9 549 aa16.45■□□□□ 0.22
COL7A1-203ENST00000459756 PLK4O00444 970 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms