RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SMOC1Q9H4F8 434 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 DHX35Q9H5Z1 703 aaKnown RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 ZNF212Q9UDV6 495 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 PCSK1NQ9UHG2 260 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 LCMT1Q9UIC8 334 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 TPX2Q9ULW0 747 aaKnown RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 SLC6A14Q9UN76 642 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 AP4E1Q9UPM8 1137 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 ZSCAN5CA6NGD5 496 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 MYO1FO00160 1098 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 MID1O15344 667 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 BNIP3LO60238 219 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 SYPP08247 313 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 GOT1P17174 413 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 PCK1P35558 622 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 ATXN3P54252 364 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 YBEYP58557 167 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 SLC18A3Q16572 532 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 BOLA3Q53S33 107 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 DCAF12L1Q5VU92 463 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 PEAR1Q5VY43 1037 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 HDDC3Q8N4P3 179 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 CTNNBL1Q8WYA6 563 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 CCDC42Q96M95 316 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 ACE2Q9BYF1 805 aaPredicted RBP23.69■■□□□ 1.38
CBX3-204ENST00000456948 THAP2Q9H0W7 228 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 PI4KAP42356 2102 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 CEP250Q9BV73 2442 aa23.69■■□□□ 1.38
CBX3-204ENST00000456948 MT-CO1P00395 513 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 CYP1A2P05177 515 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 SERPINF2P08697 491 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 MIPP30301 263 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 ACSL1P33121 698 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 Q6ZVU0 165 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 PYROXD2Q8N2H3 581 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 DNASE2BQ8WZ79 361 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 ARHGEF2Q92974 986 aaKnown RBP23.68■■□□□ 1.38
CBX3-204ENST00000456948 ANP32EQ9BTT0 268 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 EDEM2Q9BV94 578 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 NUP85Q9BW27 656 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 MIR1-1HGQ9H1L0 117 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 DYRK4Q9NR20 520 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 ABHD10Q9NUJ1 306 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 TMEM74BQ9NUR3 256 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 ANAPC7Q9UJX3 599 aa23.68■■□□□ 1.38
CBX3-204ENST00000456948 A0A1W2PP55 124 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 WASH4PA8MWX3 477 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 AKR1B15C9JRZ8 316 aaPredicted RBP23.67■■□□□ 1.38
CBX3-204ENST00000456948 EEF2KO00418 725 aaKnown RBP23.67■■□□□ 1.38
CBX3-204ENST00000456948 SLC30A4O14863 429 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 GDF9O60383 454 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 MFAP3LO75121 409 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 PRNPP04156 253 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 H2AFZP0C0S5 128 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 SERPINH1P50454 418 aaKnown RBP23.67■■□□□ 1.38
CBX3-204ENST00000456948 IRX4P78413 519 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 MAPK8IP2Q13387 824 aaPredicted RBP23.67■■□□□ 1.38
CBX3-204ENST00000456948 PARP15Q460N3 678 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 DAB2IPQ5VWQ8 1189 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 TCEAL6Q6IPX3 200 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 LINGO4Q6UY18 593 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 H2AFVQ71UI9 128 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 PCDH20Q8N6Y1 951 aaKnown RBP23.67■■□□□ 1.38
CBX3-204ENST00000456948 SNX19Q92543 992 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 TCEAL3Q969E4 200 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 ZWILCHQ9H900 591 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 TMEM9BQ9NQ34 198 aa23.67■■□□□ 1.38
CBX3-204ENST00000456948 ATXN2Q99700 1313 aaKnown RBP23.66■■□□□ 1.38
CBX3-204ENST00000456948 A0A1B0GTW7 788 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 SLC7A4O43246 635 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 KDELR3O43731 214 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 VAV1P15498 845 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 DNA2P51530 1060 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 GALCP54803 685 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 ARTNQ5T4W7 220 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 STPG1Q5TH74 334 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 TMIEQ8NEW7 156 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 PIP4K2CQ8TBX8 421 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 CASKIN2Q8WXE0 1202 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 ISG20Q96AZ6 181 aaKnown RBP23.66■■□□□ 1.38
CBX3-204ENST00000456948 MAGEB5Q9BZ81 275 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 NEUROG2Q9H2A3 272 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 UVRAGQ9P2Y5 699 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 PPM1HQ9ULR3 514 aa23.66■■□□□ 1.38
CBX3-204ENST00000456948 LNP1A1A4G5 178 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 DCDC2BA2VCK2 349 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 FAM47DPA6NHR8 397 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 PATE3B3GLJ2 98 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 LRCH4O75427 683 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 ZMPSTE24O75844 475 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 CHRNA3P32297 505 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 ACVRL1P37023 503 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 ADKP55263 362 aaKnown RBP23.65■■□□□ 1.38
CBX3-204ENST00000456948 ZNF252P-AS1Q0IIN9 211 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 SEMA3BQ13214 749 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 HADHQ16836 314 aaKnown RBP23.65■■□□□ 1.38
CBX3-204ENST00000456948 PPP6R3Q5H9R7 873 aaPredicted RBP23.65■■□□□ 1.38
CBX3-204ENST00000456948 C22orf39Q6P5X5 142 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 OR2T34Q8NGX1 318 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 OR14C36Q8NHC7 312 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms