RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HOXD1Q9GZZ0 328 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 RNF38Q9H0F5 515 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 UPF3AQ9H1J1 476 aaKnown RBP7.79□□□□□ -1.16
HDAC9-218ENST00000456174 CAAP1Q9H8G2 361 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 SPC25Q9HBM1 224 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 SACM1LQ9NTJ5 587 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 DPP3Q9NY33 737 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 SNTG2Q9NY99 539 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 IL20Q9NYY1 176 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 ITGA11Q9UKX5 1188 aa7.79□□□□□ -1.16
HDAC9-218ENST00000456174 SCN1AP35498 2009 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 A0A0G2JND7 137 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 GOLGA8QA0A0J9YX86 632 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 GOLGA8OA6NCC3 632 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 FAM25EA8MYX2 175 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 GOLGA8NF8WBI6 632 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 GOLGA8RI6L899 631 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CAPNS1P04632 268 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ATP5BP06576 529 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 DLDP09622 509 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CHKAP35790 457 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 COILP38432 576 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CRYBB1P53674 252 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 IST1P53990 364 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CAP1Q01518 475 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 SP3Q02447 781 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CAV1Q03135 178 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 DPYSQ14117 519 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PTK2BQ14289 1009 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TMED2Q15363 201 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 OASLQ15646 514 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 INSCQ1MX18 579 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 C2CD6Q53TS8 623 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CCDC137Q6PK04 289 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 MON1BQ7L1V2 547 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TTC7BQ86TV6 843 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 SLC25A41Q8N5S1 370 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 GSTCDQ8NEC7 633 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TNIP2Q8NFZ5 429 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RAB3IL1Q8TBN0 382 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 C12orf43Q96C57 262 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 THAP11Q96EK4 314 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ZNF486Q96H40 463 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 HPDLQ96IR7 371 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CAPNS2Q96L46 248 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PLEKHA5Q9HAU0 1116 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 FANCEQ9HB96 536 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 AVENQ9NQS1 362 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RIC8BQ9NVN3 520 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 SEPT10Q9P0V9 454 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PIN4Q9Y237 131 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 FARP1Q9Y4F1 1045 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 SF3B1O75533 1304 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 MYOCOSA0A1B0GUC4 107 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 FADS2P1A8MWK0 482 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 AREL1O15033 823 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RAG1P15918 1043 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ITIH2P19823 946 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 COMTP21964 271 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RRM1P23921 792 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RPA3P35244 121 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CPOXP36551 454 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ETFBP38117 255 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CPA2P48052 419 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 APLP1P51693 650 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 BMXP51813 675 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CDH8P55286 799 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ARL4CP56559 192 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RBP5P82980 135 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PPP2R2BQ00005 443 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 NFE2Q16621 373 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ZBED5Q49AG3 693 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 NDUFAF5Q5TEU4 345 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 LIN9Q5TKA1 542 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PPP1R2P3Q6NXS1 205 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PGM2L1Q6PCE3 622 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 PHF13Q86YI8 300 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RAVER1Q8IY67 606 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 TRIML2Q8N7C3 387 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 UBL4BQ8N7F7 174 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 VPS37AQ8NEZ2 397 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 ZNF420Q8TAQ5 688 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 VCPIP1Q96JH7 1222 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CNBD2Q96M20 576 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 RBM15Q96T37 977 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 C11orf70Q9BRQ4 267 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 REPIN1Q9BWE0 567 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 NMUR2Q9GZQ4 415 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 SDCBP2Q9H190 292 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 CXCL16Q9H2A7 254 aa7.78□□□□□ -1.16
HDAC9-218ENST00000456174 NXF3Q9H4D5 531 aaKnown RBP7.78□□□□□ -1.16
HDAC9-218ENST00000456174 VRTNQ9H8Y1 702 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms