RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 VNN1O95497 513 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ITGB2P05107 769 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ITGA2BP08514 1039 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 HSPA1AP0DMV8 641 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 HSPA1BP0DMV9 641 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CXCL8P10145 99 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CKBP12277 381 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 UCHL3P15374 230 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CHMP24386 653 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 AOAHP28039 575 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ACTN2P35609 894 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MXI1P50539 228 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 AP3M2P53677 418 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 POLE2P56282 527 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 POLR2FP61218 127 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 OSTNP61366 133 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MGAT2Q10469 447 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 LPIN1Q14693 890 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SMAD1Q15797 465 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 DCAF4L1Q3SXM0 396 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 HECTD3Q5T447 861 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF618Q5T7W0 954 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 KIAA1614Q5VZ46 1190 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 HLA-DQA1Q5Y7H0 255 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 STEAP3Q658P3 488 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 LIN54Q6MZP7 749 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SLC30A6Q6NXT4 461 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 BORAQ6PGQ7 559 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SHISA2Q6UWI4 295 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ALKAL1Q6UXT8 129 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RNF111Q6ZNA4 994 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 Q6ZS46 218 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RRAGAQ7L523 313 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CACNA2D4Q7Z3S7 1137 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 GATAD2AQ86YP4 633 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 WDR49Q8IV35 697 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RBM12BQ8IXT5 1001 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 LZTR1Q8N653 840 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 FBXL13Q8NEE6 735 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCDC112Q8NEF3 446 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 OR5B17Q8NGF7 314 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 OR6B3Q8NGW1 331 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 KIAA1524Q8TCG1 905 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 TAS1R2Q8TE23 839 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 U2AF1L4Q8WU68 220 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 GAB3Q8WWW8 586 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ATP2A3Q93084 1043 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 FOXRED1Q96CU9 486 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 NMD3Q96D46 503 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM84AQ96KN4 292 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SPATA17Q96L03 361 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYRFLQ96LU7 910 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 COG8Q96MW5 612 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SAMD11Q96NU1 681 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CHP1Q99653 195 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 VRK1Q99986 396 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ADPGKQ9BRR6 497 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 PAIP1Q9H074 479 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASB7Q9H672 318 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 AGO3Q9H9G7 860 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ERVK-5Q9HDB9 667 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 C1GALT1Q9NS00 363 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RBM12Q9NTZ6 932 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ABHD10Q9NUJ1 306 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ARGLU1Q9NWB6 273 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNHIT6Q9NWK9 470 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RAB20Q9NX57 234 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 AIPL1Q9NZN9 384 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 TBC1D29Q9UFV1 150 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 PADI3Q9ULW8 664 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYO6Q9UM54 1294 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 PIN4Q9Y237 131 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASB1Q9Y576 335 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 SQORQ9Y6N5 450 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 CAPN6Q9Y6Q1 641 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MROH7Q68CQ1 1323 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 PDCD11Q14690 1871 aaKnown RBP5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYH10P35580 1976 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 LRRC53A6NM62 1247 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 PRR33A8MZF0 331 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 TBC1D4O60343 1298 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZC3H11AO75152 810 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 LEFTY1O75610 366 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 FSBPO95073 299 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 NDST3O95803 873 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 PRLP01236 227 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 HLA-DRAP01903 254 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 TNNC2P02585 160 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 MT-ND5P03915 603 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 ITGA5P08648 1049 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 GHRP10912 638 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 SRFP11831 508 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 COL8A1P27658 744 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 CD52P31358 61 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 EPHA5P54756 1037 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 TFAMQ00059 246 aaKnown RBP5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 CYP27A1Q02318 531 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 WASHC5Q12768 1159 aa5.42□□□□□ -1.54
HMGB1P4-201ENST00000455362 ERV3-1Q14264 604 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms