RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 FRS2Q8WU20 508 aa15□□□□□ -0.01
VPS16-205ENST00000453689 PTPRN2Q92932 1015 aa15□□□□□ -0.01
VPS16-205ENST00000453689 TRIM44Q96DX7 344 aaPredicted RBP15□□□□□ -0.01
VPS16-205ENST00000453689 GOLPH3Q9H4A6 298 aa15□□□□□ -0.01
VPS16-205ENST00000453689 RETREG1Q9H6L5 497 aa15□□□□□ -0.01
VPS16-205ENST00000453689 TMEM248Q9NWD8 314 aa15□□□□□ -0.01
VPS16-205ENST00000453689 GPATCH2LQ9NWQ4 482 aa15□□□□□ -0.01
VPS16-205ENST00000453689 VPS51Q9UID3 782 aa15□□□□□ -0.01
VPS16-205ENST00000453689 AP4E1Q9UPM8 1137 aa15□□□□□ -0.01
VPS16-205ENST00000453689 CAPN6Q9Y6Q1 641 aa15□□□□□ -0.01
VPS16-205ENST00000453689 PTPRZ1P23471 2315 aaPredicted RBP15□□□□□ -0.01
VPS16-205ENST00000453689 TARSL2A2RTX5 802 aaKnown RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 GOLGA6L9A6NEM1 432 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 ATP9BO43861 1147 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 CREB3O43889 395 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 PALMO75781 387 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 KRT7P08729 469 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 ACADMP11310 421 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 GLDCP23378 1020 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 GJC1P36383 396 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 MAPKAPK2P49137 400 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 DHPSP49366 369 aaPredicted RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 TPMTP51580 245 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 RPL6Q02878 288 aaKnown RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 GNA12Q03113 381 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 CCDC6Q16204 474 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 LRRC38Q5VT99 294 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 ZNF776Q68DI1 518 aaPredicted RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 SH2D3CQ8N5H7 860 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 KIAA1524Q8TCG1 905 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 TEKT4Q8WW24 435 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 ALS2CR12Q96Q35 445 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 C2orf49Q9BVC5 232 aaPredicted RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 RSPH9Q9H1X1 276 aaPredicted RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 DHX35Q9H5Z1 703 aaKnown RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 ZWILCHQ9H900 591 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 TRMT1Q9NXH9 659 aaKnown RBP14.99□□□□□ -0.01
VPS16-205ENST00000453689 DNAI1Q9UI46 699 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 HS3ST2Q9Y278 367 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 HYOU1Q9Y4L1 999 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 PCDHGA5Q9Y5G8 931 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 TMEM131Q92545 1883 aa14.99□□□□□ -0.01
VPS16-205ENST00000453689 BCLAF3A2AJT9 711 aaKnown RBP14.98□□□□□ -0.01
VPS16-205ENST00000453689 PSTPIP1O43586 416 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 MT-CO1P00395 513 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 IGLV3-19P01714 112 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 RARAP10276 462 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 SRCP12931 536 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 EPHB2P29323 1055 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 CD6P30203 668 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 MPLP40238 635 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 CREB5Q02930 508 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 CA9Q16790 459 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 SMTNL2Q2TAL5 461 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 ACCSLQ4AC99 568 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 SPDYCQ5MJ68 293 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 PLA2G2CQ5R387 149 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 TXNRD3NBQ6F5E7 133 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 ARMCX6Q7L4S7 300 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 RHOT1Q8IXI2 618 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 STK40Q8N2I9 435 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 DEFB119Q8N690 84 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 GPR161Q8N6U8 529 aaKnown RBP14.98□□□□□ -0.01
VPS16-205ENST00000453689 HSPH1Q92598 858 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 ARHGEF2Q92974 986 aaKnown RBP14.98□□□□□ -0.01
VPS16-205ENST00000453689 TOE1Q96GM8 510 aaKnown RBP14.98□□□□□ -0.01
VPS16-205ENST00000453689 FAM129BQ96TA1 746 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 EPAS1Q99814 870 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 SPON2Q9BUD6 331 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 SEMA4GQ9NTN9 838 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 WSB2Q9NYS7 404 aaPredicted RBP14.98□□□□□ -0.01
VPS16-205ENST00000453689 CFAP54Q96N23 3096 aa14.98□□□□□ -0.01
VPS16-205ENST00000453689 PCDH15Q96QU1 1955 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 K7ERQ8 282 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 CBX4O00257 560 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 RNASEH1O60930 286 aaKnown RBP14.97□□□□□ -0.01
VPS16-205ENST00000453689 NDUFS2O75306 463 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 ZMPSTE24O75844 475 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 DNTTP04053 509 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 HTR7P34969 479 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 ACVRL1P37023 503 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 PTGER3P43115 390 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 ZNF135P52742 658 aaPredicted RBP14.97□□□□□ -0.01
VPS16-205ENST00000453689 TPI1P60174 286 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 ARF5P84085 180 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 ZBTB16Q05516 673 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 DLG2Q15700 870 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 CSRP2Q16527 193 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 DPYSL2Q16555 572 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 KCNT1Q5JUK3 1230 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 LINGO4Q6UY18 593 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 CYP2U1Q7Z449 544 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 FAM124AQ86V42 546 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 MMAAQ8IVH4 418 aaKnown RBP14.97□□□□□ -0.01
VPS16-205ENST00000453689 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 RTL3Q8N8U3 475 aaKnown RBP14.97□□□□□ -0.01
VPS16-205ENST00000453689 ATP11CQ8NB49 1132 aa14.97□□□□□ -0.01
VPS16-205ENST00000453689 TRIM58Q8NG06 486 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms