RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ILVBLA1L0T0 632 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 C1QTNF3-AMACRE9PGA6 284 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 H0Y8X5 98 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 WNT9AO14904 365 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 FLRT2O43155 660 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 SMAD6O43541 496 aaKnown RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 SRGAP2O75044 1071 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 RTN2O75298 545 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ZMPSTE24O75844 475 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 KRT37O76014 449 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 TRIM16O95361 564 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 PROS1P07225 676 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 FTH1P19P0C7X4 201 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 CDK11BP21127 795 aaKnown RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 SDC4P31431 198 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ADRA1BP35368 520 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 NSFP46459 744 aaKnown RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 CLCN6P51797 869 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 HDAC4P56524 1084 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 CNTN1Q12860 1018 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 POM121L1PQ3SYA9 428 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 FAM46CQ5VWP2 391 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 LINGO4Q6UY18 593 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 STRADAQ7RTN6 431 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ADAT2Q7Z6V5 191 aaKnown RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ATP11CQ8NB49 1132 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 C3orf20Q8ND61 904 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 SETD7Q8WTS6 366 aaKnown RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ACE2Q9BYF1 805 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ADAM22Q9P0K1 906 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 ARHGAP20Q9P2F6 1191 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 KLK13Q9UKR3 277 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 PCDHB9Q9Y5E1 797 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 PTPRBP23467 1997 aa12.77□□□□□ -0.37
CPSF4-208ENST00000452047 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 DSPP15924 2871 aaKnown RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3DA0A087WVF3 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3IA0A087WXS9 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 RNF103O00237 685 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 KCNK3O14649 394 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 BNIP3LO60238 219 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 ZNF821O75541 412 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 KRT3P12035 628 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 CD38P28907 300 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 RFC1P35251 1148 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 CCT8P50990 548 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TAS2R38P59533 333 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 ARF5P84085 180 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 ANO6Q4KMQ2 910 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 PIP5KL1Q5T9C9 394 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3CQ6IPX1 549 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 NLRP14Q86W24 1093 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TRIM69Q86WT6 500 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D3Q8IZP1 549 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-208ENST00000452047 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 ADAMTS14Q8WXS8 1223 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 BPIFA3Q9BQP9 254 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 SYT11Q9BT88 431 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 OSBPL2Q9H1P3 480 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 NDFIP2Q9NV92 336 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 TOR4AQ9NXH8 423 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 MSRB2Q9Y3D2 182 aa12.76□□□□□ -0.37
CPSF4-208ENST00000452047 A0A1B0GTQ1 180 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CBX4O00257 560 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 TEX33O43247 280 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 DKK1O94907 266 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CD160O95971 181 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CALB1P05937 261 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CHRNA3P32297 505 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 SERPINH1P50454 418 aaKnown RBP12.75□□□□□ -0.37
CPSF4-208ENST00000452047 C21orf59P57076 290 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 GNA12Q03113 381 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
CPSF4-208ENST00000452047 SCAPQ12770 1279 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 WDR59Q6PJI9 974 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 SLCO6A1Q86UG4 719 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 DRC7Q8IY82 874 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms