RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.312e-7■■■■■ 53.5
SHC1-210ENST00000448116 NUP205Q92621 2012 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 THRAP10827 490 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 SMPD1P17405 629 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 LILRA4P59901 499 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 PDK3Q15120 406 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 RWDD4Q6NW29 188 aaKnown RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 RCN3Q96D15 328 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ADAMTS10Q9H324 1103 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 PTPRFP10586 1907 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 STX16-NPEPL1H3BU86 382 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 DCLK1O15075 740 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 MPOP05164 745 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 FOLH1Q04609 750 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 DPYSQ14117 519 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
SHC1-210ENST00000448116 SV2CQ496J9 727 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 ADGRG6Q86SQ4 1221 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 SLC41A1Q8IVJ1 513 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 GPRC5AQ8NFJ5 357 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
SHC1-210ENST00000448116 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 AK5Q9Y6K8 562 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TIMM44O43615 452 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TFEBP19484 476 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 CD68P34810 354 aaPredicted RBP13.13□□□□□ -0.31
SHC1-210ENST00000448116 SCNN1AP37088 669 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 MTTPP55157 894 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 CTBP1Q13363 440 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 ART3Q13508 389 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 FLOT2Q14254 428 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 POU6F1Q14863 301 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 DGKDQ16760 1214 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TMC7Q7Z402 723 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 KYQ8NBH2 561 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 SPATA22Q8NHS9 363 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TMEM40Q8WWA1 233 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 TMA16Q96EY4 203 aaKnown RBP13.13□□□□□ -0.31
SHC1-210ENST00000448116 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 ZFP42Q96MM3 310 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
SHC1-210ENST00000448116 I6L893 689 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■□□ 17.8
SHC1-210ENST00000448116 XRCC1P18887 633 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 DSELQ8IZU8 1212 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 COPS7BQ9H9Q2 264 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 GTF2IRD1Q9UHL9 959 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 COL1A2P08123 1366 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 DFFAO00273 331 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 HDAC3O15379 428 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 MMP3P08254 477 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 THOP1P52888 689 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 FAM156AQ8NDB6 213 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 SERPINI1Q99574 410 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 GORASP1Q9BQQ3 440 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 SPATA16Q9BXB7 569 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 OXSMQ9NWU1 459 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 RGSL1A5PLK6 1076 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 OR6B1O95007 311 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 VAPBO95292 243 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 DARSP14868 501 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 CYP2B6P20813 491 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 CNGA3Q16281 694 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 DENND6AQ8IWF6 608 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 PQLC1Q8N2U9 271 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 NMD3Q96D46 503 aaKnown RBP13.12□□□□□ -0.31
SHC1-210ENST00000448116 ATXN3LQ9H3M9 355 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
SHC1-210ENST00000448116 A0A1B0GVG6 124 aa13.11□□□□□ -0.31
SHC1-210ENST00000448116 TMEM233B4DJY2 109 aa13.11□□□□□ -0.31
SHC1-210ENST00000448116 GPR32O75388 356 aa13.11□□□□□ -0.31
SHC1-210ENST00000448116 JUNP05412 331 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms