RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 NCKAP1Q9Y2A7 1128 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 CACNA1HO95180 2353 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 LAMA1P25391 3075 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 CEP192Q8TEP8 1941 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF487B1APH4 448 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 PJA2O43164 708 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 ARHGAP6O43182 974 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 NDUFS2O75306 463 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 ZMPSTE24O75844 475 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 NUMBP49757 651 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 NAP1L1P55209 391 aaKnown RBP11.06□□□□□ -0.64
HDAC6-211ENST00000443563 RPS14P62263 151 aaKnown RBP11.06□□□□□ -0.64
HDAC6-211ENST00000443563 SERINC3Q13530 473 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 MAP7D1Q3KQU3 841 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 INO80DQ53TQ3 878 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-211ENST00000443563 FAM46CQ5VWP2 391 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 TXNRD3NBQ6F5E7 133 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 C11orf63Q6NUN7 778 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 LPCAT2Q7L5N7 544 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 KBTBD6Q86V97 674 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 LOXL4Q96JB6 756 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 LRRC19Q9H756 370 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
HDAC6-211ENST00000443563 GMEB2Q9UKD1 530 aa11.06□□□□□ -0.64
HDAC6-211ENST00000443563 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDAC6-211ENST00000443563 IGHV1OR15-9A0A0B4J2B8 117 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PRR23AA6NEV1 266 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 C1QTNF3-AMACRE9PGA6 284 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 MCF2LO15068 1137 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 DCLK1O15075 740 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PSTPIP1O43586 416 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 BUB1O43683 1085 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 BUB1BO60566 1050 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-211ENST00000443563 MT-CO1P00395 513 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 IGLV3-19P01714 112 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 C5AR1P21730 350 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 COMTP21964 271 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 AMPD1P23109 780 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 GLDCP23378 1020 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 KDELR1P24390 212 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 CD6P30203 668 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 DPP6P42658 865 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PAPOLAP51003 745 aaKnown RBP11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TPMTP51580 245 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 ARSEP51690 589 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TAS2R40P59535 323 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 ARF5P84085 180 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 SRSF5Q13243 272 aaKnown RBP11.05□□□□□ -0.64
HDAC6-211ENST00000443563 DPYSL3Q14195 570 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 CST6Q15828 149 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PLK5Q496M5 336 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TMCO4Q5TGY1 634 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 C22orf39Q6P5X5 142 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 LINGO4Q6UY18 593 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 Q6ZVU0 165 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 USP30Q70CQ3 517 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 LRRC8AQ8IWT6 810 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 STK40Q8N2I9 435 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 SUMF1Q8NBK3 374 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 ACRBPQ8NEB7 543 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 RLN3Q8WXF3 142 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TSC1Q92574 1164 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 HMCESQ96FZ2 354 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 TSGA10Q9BZW7 698 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 SLC39A8Q9C0K1 460 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 SLC6A17Q9H1V8 727 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 NOL6Q9H6R4 1146 aaKnown RBP11.05□□□□□ -0.64
HDAC6-211ENST00000443563 NCDNQ9UBB6 729 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 CYP8B1Q9UNU6 501 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 INVSQ9Y283 1065 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
HDAC6-211ENST00000443563 ALG6Q9Y672 507 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 SPAG17Q6Q759 2223 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 THADAQ6YHU6 1953 aa11.05□□□□□ -0.64
HDAC6-211ENST00000443563 NUP205Q92621 2012 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF292O60281 2723 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 DFFAO00273 331 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 SMAD6O43541 496 aaKnown RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 KRT86O43790 486 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 BNIP3LO60238 219 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PRAMEF11O60813 436 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 GSRP00390 522 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 IL1BP01584 269 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 PRNPP04156 253 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 RETP07949 1114 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-211ENST00000443563 IL4RP24394 825 aa11.04□□□□□ -0.64
HDAC6-211ENST00000443563 SLC8A1P32418 973 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms