RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PDCL2Q8N4E4 241 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 BICD2Q8TD16 824 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 THAP4Q8WY91 577 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 INPP5DQ92835 1189 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 FAM131CQ96AQ9 280 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 COX4I2Q96KJ9 171 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 IFT74Q96LB3 600 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 TSPAN18Q96SJ8 248 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 FAM129BQ96TA1 746 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 CLPBQ9H078 707 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 TCEAL2Q9H3H9 227 aaPredicted RBP7.43□□□□□ -1.22
SSXP3-201ENST00000442971 ZBTB40Q9NUA8 1239 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 OCIAD1Q9NX40 245 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 APOBEC3BQ9UH17 382 aaKnown RBP7.43□□□□□ -1.22
SSXP3-201ENST00000442971 TRPS1Q9UHF7 1281 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 DDX25Q9UHL0 483 aaKnown RBP7.43□□□□□ -1.22
SSXP3-201ENST00000442971 IPO11Q9UI26 975 aaKnown RBP7.43□□□□□ -1.22
SSXP3-201ENST00000442971 PLEKHA6Q9Y2H5 1048 aa7.43□□□□□ -1.22
SSXP3-201ENST00000442971 NCOA6Q14686 2063 aaPredicted RBP7.42□□□□□ -1.22
SSXP3-201ENST00000442971 SLC37A4O43826 429 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 CPNE6O95741 557 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 TBX18O95935 607 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 IL1BP01584 269 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 CYBBP04839 570 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 PTPN1P18031 435 aaKnown RBP7.42□□□□□ -1.22
SSXP3-201ENST00000442971 CDC27P30260 824 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 HLA-FP30511 346 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 ANO6Q4KMQ2 910 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 FAM129CQ86XR2 697 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 ACRBPQ8NEB7 543 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 PANK1Q8TE04 598 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 CCDC12Q8WUD4 166 aaPredicted RBP7.42□□□□□ -1.22
SSXP3-201ENST00000442971 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
SSXP3-201ENST00000442971 MYLPFQ96A32 169 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 MBD6Q96DN6 1003 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 BMFQ96LC9 184 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 C8orf48Q96LL4 319 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 CTRCQ99895 268 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 EIF2AK1Q9BQI3 630 aaKnown RBP7.42□□□□□ -1.22
SSXP3-201ENST00000442971 LRRC61Q9BV99 259 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 DOLKQ9UPQ8 538 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 MAPK8IP1Q9UQF2 711 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 SLC12A7Q9Y666 1083 aa7.42□□□□□ -1.22
SSXP3-201ENST00000442971 TRGV8A0A0C4DH27 118 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 POM121BA6NF01 834 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 HCRTO43612 131 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 TLR5O60602 858 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 DLGAP3O95886 979 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 XRCC6P12956 609 aaKnown RBP eCLIP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 PNLIPP16233 465 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 GLB1P16278 677 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 TSHRP16473 764 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 EIF2B5Q13144 721 aaKnown RBP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 TRA2AQ13595 282 aaKnown RBP eCLIP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 MAP7Q14244 749 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 PFKFB3Q16875 520 aaPredicted RBP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 SV2CQ496J9 727 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 JADE1Q6IE81 842 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 PLEKHA7Q6IQ23 1121 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 MOXD1Q6UVY6 613 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 CAMKMTQ7Z624 323 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 SLC47A2Q86VL8 602 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 MICU3Q86XE3 530 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 SFR1Q86XK3 245 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 PCDH19Q8TAB3 1148 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 EPS8L1Q8TE68 723 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 GRHL3Q8TE85 626 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 DDI1Q8WTU0 396 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 MYO19Q96H55 970 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 TBATAQ96M53 351 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 SMAD5Q99717 465 aaKnown RBP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 HSD17B14Q9BPX1 270 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 ZNF559Q9BR84 538 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 ZPBPQ9BS86 351 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 POLD4Q9HCU8 107 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 KCNMB3Q9NPA1 279 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 CRTAC1Q9NQ79 661 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 AJAP1Q9UKB5 411 aaPredicted RBP7.41□□□□□ -1.22
SSXP3-201ENST00000442971 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 EDARQ9UNE0 448 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 HS3ST3A1Q9Y663 406 aa7.41□□□□□ -1.22
SSXP3-201ENST00000442971 NYNRINQ9P2P1 1898 aaKnown RBP7.4□□□□□ -1.22
SSXP3-201ENST00000442971 A0A1W2PQU0 124 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 E7EWF7 191 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 SPINT1O43278 529 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 TOM1L1O75674 476 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 PCSK1P29120 753 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 MAN1A1P33908 653 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 METAP1P53582 386 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 ST8SIA6P61647 398 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 DEFA6Q01524 100 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 PDE1CQ14123 709 aaPredicted RBP7.4□□□□□ -1.22
SSXP3-201ENST00000442971 ZNF284Q2VY69 593 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 LYPLAL1Q5VWZ2 237 aa7.4□□□□□ -1.22
SSXP3-201ENST00000442971 LVRNQ6Q4G3 990 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms