RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 FAM114A2Q9NRY5 505 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 ADAM22Q9P0K1 906 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 TFR2Q9UP52 801 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CAPN6Q9Y6Q1 641 aa6.68□□□□□ -1.34
HDAC6-210ENST00000441703 TLN1Q9Y490 2541 aaKnown RBP6.68□□□□□ -1.34
HDAC6-210ENST00000441703 CKAP5Q14008 2032 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 NUMA1Q14980 2115 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CACNA1DQ01668 2161 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 BICDL2A1A5D9 508 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 LACTBL1A8MY62 500 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CCDC188H7C350 402 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 O00370 1275 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM24O15164 1050 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SLC16A4O15374 487 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 RAD51CO43502 376 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CREB3O43889 395 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ATP2C2O75185 946 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CSO75390 466 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 OLFM2O95897 454 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 OR52Z1P0C646 297 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MAPTP10636 758 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ACADSP16219 412 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM21P19474 475 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CALB2P22676 271 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ACP1P24666 158 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CYP2F1P24903 491 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CD27P26842 260 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 EPHA8P29322 1005 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ECHS1P30084 290 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 EIF4A3P38919 411 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MSH2P43246 934 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MMP13P45452 471 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TRAPPC10P48553 1259 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TAF6P49848 677 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 KIF11P52732 1056 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 BCAT1P54687 386 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SH3BGRP55822 239 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MAGOHP61326 146 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CYP27A1Q02318 531 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CCDC15Q0P6D6 951 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SFSWAPQ12872 951 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ORC2Q13416 577 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SETDB1Q15047 1291 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ENOX2Q16206 610 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ECM1Q16610 540 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 C3orf38Q5JPI3 329 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 PPP1R15BQ5SWA1 713 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 FKBP15Q5T1M5 1219 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 WSCD1Q658N2 575 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 IRGCQ6NXR0 463 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TTI2Q6NXR4 508 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ASRGL1Q7L266 308 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 PTRH1Q86Y79 214 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SPATA2LQ8IUW3 424 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TMEM161BQ8NDZ6 487 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ACTRT1Q8TDG2 376 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SAP25Q8TEE9 199 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SYN2Q92777 582 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 KCNN1Q92952 543 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 HPS3Q969F9 1004 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 MAGOHBQ96A72 148 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SGF29Q96ES7 293 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 PGM2Q96G03 612 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 EPSTI1Q96J88 318 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 PLEKHG4BQ96PX9 1271 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 KRT12Q99456 494 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 NTPCRQ9BSD7 190 aaKnown RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TUBGCP2Q9BSJ2 902 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TIPINQ9BVW5 301 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TXLNGYQ9BZA5 131 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM7Q9C029 511 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 HAPLN2Q9GZV7 340 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ZWILCHQ9H900 591 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ASCL3Q9NQ33 180 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SPHK2Q9NRA0 654 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 TMLHEQ9NVH6 421 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 EHD2Q9NZN4 543 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 CTTNBP2NLQ9P2B4 639 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 HCN2Q9UL51 889 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 AGAP1Q9UPQ3 857 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-210ENST00000441703 DERAQ9Y315 318 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 PCDHGA4Q9Y5G9 962 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 SLCO1B1Q9Y6L6 691 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 STON1Q9Y6Q2 735 aa6.67□□□□□ -1.34
HDAC6-210ENST00000441703 WASH3PC4AMC7 463 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 NEDD8-MDP1E9PL57 170 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 F8VZ95 297 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 PSMA7O14818 248 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 VILLO15195 856 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 OGTO15294 1046 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 ZSCAN9O15535 394 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-210ENST00000441703 CYP26A1O43174 497 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 SNX3O60493 162 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 SUN1O94901 812 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 UBOX5O94941 541 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
HDAC6-210ENST00000441703 SEMA4FO95754 770 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms