RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GXYLT1Q4G148 440 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 ISLR2Q6UXK2 745 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 ZC3H7AQ8IWR0 971 aaKnown RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 GALNT6Q8NCL4 622 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 RLN2P04090 185 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 CDK7P50613 346 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 SNX32Q86XE0 403 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 PIH1D2Q8WWB5 315 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 IFT46Q9NQC8 304 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 ANGPT4Q9Y264 503 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 CHST10O43529 356 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 EPORP19235 508 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 RBM20Q5T481 1227 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 LCN1P1Q5VSP4 162 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 NIF3L1Q9GZT8 377 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 KCNN2Q9H2S1 579 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 LRIG2O94898 1065 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 NADKO95544 446 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 MECP2P51608 486 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 ALDH5A1P51649 535 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 RAPSNQ13702 412 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 HECTD3Q5T447 861 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 TRIM9Q9C026 710 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 USP18Q9UMW8 372 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 PP2D1A8MPX8 630 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 PCDH8O95206 1070 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 CCNE2O96020 404 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 SH3RF3Q8TEJ3 882 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 KCTD4Q8WVF5 259 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 ZNF639Q9UID6 485 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 OR2AT4A6NND4 320 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 CDK9P50750 372 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 E2F2Q14209 437 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 ZZZ3Q8IYH5 903 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 ZNF548Q8NEK5 533 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 COL26A1Q96A83 441 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 GFM1Q96RP9 751 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 CPNE1Q99829 537 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 AASSQ9UDR5 926 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 RGS17Q9UGC6 210 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 PLA2G4CQ9UP65 541 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 CFAP43Q8NDM7 1665 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 GRHL2Q6ISB3 625 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 OXCT1P55809 520 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 ADAM8P78325 824 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 SCN1BQ07699 218 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 RNASE12Q5GAN4 147 aaKnown RBP16.67■□□□□ 0.26
RIF1-204ENST00000430328 TMPRSS11AQ6ZMR5 421 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 QSOX2Q6ZRP7 698 aa16.67■□□□□ 0.26
RIF1-204ENST00000430328 H3BM21 787 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 CCNYL3P0C7X3 344 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 C1GALT1C1Q96EU7 318 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 GTPBP1O00178 669 aaKnown RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 SRCP12931 536 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 CCZ1BP86790 482 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 NT5MQ9NPB1 228 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 SH3D21A4FU49 640 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 ANKDD1BA6NHY2 528 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 F9P00740 461 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 OR56A5P0C7T3 313 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 POU6F1Q14863 301 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 SLC5A9Q2M3M2 681 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 XKR3Q5GH77 459 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 ATF7IP2Q5U623 682 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 GALNT18Q6P9A2 607 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 TDRPQ86YL5 185 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 ZSWIM1Q9BR11 485 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 FANCAO15360 1455 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 PRAMEF33A0A0G2JMD5 474 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 PRAMEF10O60809 474 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 MED24O75448 989 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 PRKAG1P54619 331 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 PKNOX1P55347 436 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 SPIBQ01892 262 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 SGCDQ92629 289 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 SPAG4Q9NPE6 437 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 CST1P01037 141 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 MTFMTQ96DP5 389 aaKnown RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 OPTCQ9UBM4 332 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 GGA2Q9UJY4 613 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 PSMA1P25786 263 aaKnown RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 SPANXN3Q5MJ09 141 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 EIF5AL1Q6IS14 154 aaKnown RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 NOTUMQ6P988 496 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 GPSM1Q86YR5 675 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 HERC6Q8IVU3 1022 aa16.66■□□□□ 0.26
RIF1-204ENST00000430328 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms