RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 EDDM13A0A1B0GTR0 161 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 CLDN11O75508 207 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 MMP8P22894 467 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 MZF1P28698 734 aaPredicted RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 STK19P49842 368 aaPredicted RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 ZNF165P49910 485 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 IRAK1P51617 712 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 ATP11AP98196 1134 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 RHDQ02161 417 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 ZBTB16Q05516 673 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 TARDBPQ13148 414 aaKnown RBP eCLIP13.06□□□□□ -0.32
SGCE-203ENST00000425444 LY6DQ14210 128 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 CDO1Q16878 200 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 KIF19Q2TAC6 998 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 HNRNPA1L2Q32P51 320 aaKnown RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 CXorf57Q6NSI4 855 aaKnown RBP13.06□□□□□ -0.32
SGCE-203ENST00000425444 LRRC31Q6UY01 552 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 CADM4Q8NFZ8 388 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 NT5C3BQ969T7 300 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 MYO19Q96H55 970 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 IGSF5Q9NSI5 407 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 SLC25A13Q9UJS0 675 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 TMEM59LQ9UK28 342 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 VPS28Q9UK41 221 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 SNX10Q9Y5X0 201 aa13.06□□□□□ -0.32
SGCE-203ENST00000425444 MYLKQ15746 1914 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 TEX33O43247 280 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 NTRK1P04629 796 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 CALB1P05937 261 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 RHOCP08134 193 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 FERP16591 822 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 SDC4P31431 198 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 CSRP3P50461 194 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 AFF3P51826 1226 aaKnown RBP13.05□□□□□ -0.32
SGCE-203ENST00000425444 CDH4P55283 916 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 TPM4P67936 248 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
SGCE-203ENST00000425444 NUMA1Q14980 2115 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 RTP5Q14D33 572 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 CLEC16AQ2KHT3 1053 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
SGCE-203ENST00000425444 TRNP1Q6NT89 227 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 ARCQ7LC44 396 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 RSPH9Q9H1X1 276 aaPredicted RBP13.05□□□□□ -0.32
SGCE-203ENST00000425444 ANLNQ9NQW6 1124 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 TMPRSS4Q9NRS4 437 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 SLCO3A1Q9UIG8 710 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 SNX11Q9Y5W9 270 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 TMEM131Q92545 1883 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
SGCE-203ENST00000425444 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 ABCA12Q86UK0 2595 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 CENPEQ02224 2701 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 SYCE3A1L190 88 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 METTL12A8MUP2 240 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 KCNK3O14649 394 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 MID1O15344 667 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 BRINP1O60477 761 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 SRGAP2O75044 1071 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 CNTN5O94779 1100 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 GJB6O95452 261 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 SEMA4FO95754 770 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 SERPINC1P01008 464 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 UNGP13051 313 aaPredicted RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 PTMSP20962 102 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 ACSL1P33121 698 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 ACTN2P35609 894 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 PSMD8P48556 350 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 CCT8P50990 548 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 CST6Q15828 149 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 ACCSLQ4AC99 568 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 C9orf64Q5T6V5 341 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 LGMNQ99538 433 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 AGPAT1Q99943 283 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 OMDQ99983 421 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms