RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 BMFQ96LC9 184 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 FZD3Q9NPG1 666 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC12A6Q9UHW9 1150 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 SALL4Q9UJQ4 1053 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 ZFR2Q9UPR6 939 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 FAM237AA0A1B0GTK4 181 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC16A3O15427 465 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 TCEA3O75764 348 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 NEBLO76041 1014 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 KRT10P13645 584 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 SYKP43405 635 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 ACADSBP45954 432 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF177Q13360 481 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 FBXL22Q6P050 247 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 CIR1Q86X95 450 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 ARL14Q8N4G2 192 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 OR52K2Q8NGK3 314 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 POPDC2Q9HBU9 364 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 DNAJC28Q9NX36 388 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 HS3ST2Q9Y278 367 aa17.17■□□□□ 0.34
CHCHD3-202ENST00000423635 COL12A1Q99715 3063 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 BSNQ9UPA5 3926 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 SPTY2D1-AS1A0A0U1RR47 76 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 A6NNZ2 444 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 PMM2O15305 246 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 EFSO43281 561 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 NME1P15531 152 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 CHRNA3P32297 505 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 FZD2Q14332 565 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 CDKN3Q16667 212 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 LINC00303Q3SY05 128 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 TMEM259Q4ZIN3 620 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 GUSBP11Q6P575 273 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 RBM44Q6ZP01 1051 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 PRICKLE2Q7Z3G6 844 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF548Q8NEK5 533 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 OR2A12Q8NGT7 310 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 WDR36Q8NI36 951 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 STK32AQ8WU08 396 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC35C1Q96A29 364 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 ARRDC3Q96B67 414 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 CCNL2Q96S94 520 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 FAM117AQ9C073 453 aa17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 FARP1Q9Y4F1 1045 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-202ENST00000423635 BOD1L1Q8NFC6 3051 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 CPED1A4D0V7 1026 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 TERTO14746 1132 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 TPP1O14773 563 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC2A3P11169 496 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 SRCP12931 536 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 NDUFA8P51970 172 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 FKBP3Q00688 224 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 NFATC3Q12968 1075 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 KYAT3Q6YP21 454 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 ERN2Q76MJ5 926 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 EFL1Q7Z2Z2 1120 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 TMEM110Q86TL2 294 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 RNF34Q969K3 372 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC4A5Q9BY07 1137 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 HDAC8Q9BY41 377 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 ST7Q9NRC1 585 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 TBC1D30Q9Y2I9 924 aa17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
CHCHD3-202ENST00000423635 UBR5O95071 2799 aaPredicted RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 POM121BA6NF01 834 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 H3BM21 787 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 KPNA3O00505 521 aaPredicted RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 BNIP3LO60238 219 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 TNFSF15O95150 251 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 PCDH8O95206 1070 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 MT-CO1P00395 513 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 CALCAP01258 141 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 PITX1P78337 314 aaPredicted RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 ZSCAN23Q3MJ62 389 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 C5orf22Q49AR2 442 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 SEL1L3Q68CR1 1132 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 SMYD4Q8IYR2 804 aaPredicted RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 WDR48Q8TAF3 677 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 KAT5Q92993 513 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 CCDC114Q96M63 670 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 RPRD1AQ96P16 312 aaPredicted RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 NT5C1BQ96P26 610 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 MED15Q96RN5 788 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 SRRTQ9BXP5 876 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 SLC17A9Q9BYT1 436 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 STARD5Q9NSY2 213 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 KLF15Q9UIH9 416 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 VPS28Q9UK41 221 aa17.14■□□□□ 0.33
CHCHD3-202ENST00000423635 PTPN13Q12923 2485 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 PMS2P1A4D2B8 440 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 RNF103O00237 685 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 AQP9O43315 295 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 CLDN11O75508 207 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 PRNPP04156 253 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms