RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 C8BP07358 591 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 GABRB3P28472 473 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 NUP107P57740 925 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC6A3Q01959 620 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 TRIM25Q14258 630 aaKnown RBP16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 RFTN1Q14699 578 aaPredicted RBP16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 PPP1R26Q5T8A7 1209 aaPredicted RBP16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 FAM219BQ5XKK7 198 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 GPR141Q7Z602 305 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 MFSD3Q96ES6 412 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 RPF1Q9H9Y2 349 aaKnown RBP16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 IGSF9Q9P2J2 1179 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 UTRNP46939 3433 aa16.95■□□□□ 0.3
NPC1L1-203ENST00000423141 PSMD12O00232 456 aaPredicted RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 SOCS2O14508 198 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 PHGDHO43175 533 aaKnown RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ATE1O95260 518 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 MPP3Q13368 585 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 HERC3Q15034 1050 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 Q3C1V9 767 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 REPS2Q8NFH8 660 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC7A14Q8TBB6 771 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 SREK1Q8WXA9 508 aaKnown RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 LPGAT1Q92604 370 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 GMLQ99445 158 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 CDT1Q9H211 546 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 TUT1Q9H6E5 874 aaKnown RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 TMPRSS4Q9NRS4 437 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC39A10Q9ULF5 831 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 KANSL1LA0AUZ9 987 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 PRORSD1PA6NEY8 169 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 TIPRLO75663 272 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 STAMBPO95630 424 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 PORP16435 677 aaPredicted RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 RHDQ02161 417 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 NHSL2Q5HYW2 709 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 LIPMQ5VYY2 423 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ZBTB46Q86UZ6 589 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ZBTB8OSQ8IWT0 167 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 HPDLQ96IR7 371 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ANKRD60Q9BZ19 345 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC38A7Q9NVC3 462 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ADAM28Q9UKQ2 775 aa16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 BARX2Q9UMQ3 279 aaPredicted RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 COL11A1P12107 1806 aaPredicted RBP16.94■□□□□ 0.3
NPC1L1-203ENST00000423141 IGKV6D-21A0A0A0MT36 114 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 BMP10O95393 424 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 AVPR1AP37288 418 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 STAT5BP51692 787 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 TUBA4AP68366 448 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 TGFBIQ15582 683 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SPANXN3Q5MJ09 141 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF567Q8N184 647 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CNTD1Q8N815 330 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 HMGCLL1Q8TB92 370 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 PAIP1Q9H074 479 aaKnown RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SFMBT1Q9UHJ3 866 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CNOT6Q9ULM6 557 aaKnown RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ZCWPW2A0A1B0GU75 182 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CCDC78A2IDD5 438 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 H0YJX3 145 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC22A2O15244 555 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 MPOP05164 745 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ZFXP17010 805 aaPredicted RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CD247P20963 164 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 UBA1P22314 1058 aaKnown RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ETFBP38117 255 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 PRKAA1Q13131 559 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 TMEM132BQ14DG7 1078 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ZYG11AQ6WRX3 759 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CHSY3Q70JA7 882 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SPNS2Q8IVW8 549 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF786Q8N393 782 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SPATA6LQ8N4H0 392 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 CCNYQ8ND76 341 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 PPWD1Q96BP3 646 aaKnown RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 NAT9Q9BTE0 207 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 EIF2B3Q9NR50 452 aaKnown RBP16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 FIS1Q9Y3D6 152 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 USP3Q9Y6I4 520 aa16.93■□□□□ 0.3
NPC1L1-203ENST00000423141 KCNK1O00180 336 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF189O75820 626 aaPredicted RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 DGKDQ16760 1214 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 XKR5Q6UX68 686 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 ZBTB49Q6ZSB9 765 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 NCCRP1Q6ZVX7 275 aaPredicted RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 HM13Q8TCT9 377 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms