RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZKSCAN8Q15776 578 aaPredicted RBP9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC14A2Q15849 920 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 ALFQ53S48 1182 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 GRTP1Q5TC63 336 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 ALG1LQ6GMV1 187 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 NADSYN1Q6IA69 706 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 FBXL22Q6P050 247 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 CASC4Q6P4E1 433 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 OTOP3Q7RTS5 596 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 RASSF3Q86WH2 238 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 CNTN4Q8IWV2 1026 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 UNC5BQ8IZJ1 945 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF461Q8TAF7 563 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 RAB3IL1Q8TBN0 382 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 IGSF8Q969P0 613 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF669Q96BR6 464 aaPredicted RBP9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 HMCESQ96FZ2 354 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 KLF6Q99612 283 aaPredicted RBP9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC25A51Q9H1U9 297 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 CCSER2Q9H7U1 834 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 VPS45Q9NRW7 570 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 TMEM39AQ9NV64 488 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 NSMCE4AQ9NXX6 385 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 SIRPGQ9P1W8 387 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 DNMT3LQ9UJW3 386 aa9.22□□□□□ -0.93
LINCMD1-201ENST00000418518 BRCA2P51587 3418 aa9.21□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF840PA6NDX5 716 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 GOLGA8RI6L899 631 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 BIRC5O15392 142 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ACSL4O60488 711 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 USP12O75317 370 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 CNTN5O94779 1100 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 BAIAP3O94812 1187 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 SEC24AO95486 1093 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 LATS1O95835 1130 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TIMP1P01033 207 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ALDOAP04075 364 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ITGA2BP08514 1039 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TACR2P21452 398 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 MAGEA9P43362 315 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 GJA8P48165 433 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PPP3CCP48454 512 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 SERPINB4P48594 390 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RENBPP51606 427 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 LIMK2P53671 638 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 WDR5P61964 334 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 SERINC3Q13530 473 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 BMPR2Q13873 1038 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 INSCQ1MX18 579 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 GALNTL6Q49A17 601 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM133BQ5BKY9 247 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PCID2Q5JVF3 399 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 CERCAMQ5T4B2 595 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TEDDM1Q5T9Z0 273 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RAP1GAP2Q684P5 730 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PDPK2PQ6A1A2 396 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 FBXO46Q6PJ61 603 aaPredicted RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 POTEHQ6S545 545 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RANBP10Q6VN20 620 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 KYAT3Q6YP21 454 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 CDHR3Q6ZTQ4 885 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TRPM8Q7Z2W7 1104 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 DDX53Q86TM3 631 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TRIM42Q8IWZ5 723 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TCEAL8Q8IYN2 117 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 OTUD6BQ8N6M0 293 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 GIPC2Q8TF65 315 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 C10orf82Q8WW14 230 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 IMP4Q96G21 291 aaKnown RBP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 MRGPRX2Q96LB1 330 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF599Q96NL3 588 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM111AQ96PZ2 611 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RANBP9Q96S59 729 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RBBP8Q99708 897 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PITPNM3Q9BZ71 974 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 HAUS2Q9NVX0 235 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 RBM22Q9NW64 420 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 KLHL14Q9P2G3 628 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 STK39Q9UEW8 545 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PHTF1Q9UMS5 762 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC12A4Q9UP95 1085 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 ATP11BQ9Y2G3 1177 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 TCAF1Q9Y4C2 921 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 YIPF1Q9Y548 306 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 PSAT1Q9Y617 370 aa9.21□□□□□ -0.94
LINCMD1-201ENST00000418518 F5H5T6 163 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PRAMEF11O60813 436 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 RAMP2O60895 175 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 LILRB3O75022 631 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 GLRA3O75311 464 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 UPP2O95045 317 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 TGDSO95455 350 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MMP2P08253 660 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 DNAJB1P25685 340 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms