RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 OR12D3Q9UGF7 316 aa18.31■□□□□ 0.52
CPNE1-210ENST00000416778 SLC7A4O43246 635 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 ZNF821O75541 412 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 CTSLP07711 333 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 KRT3P12035 628 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 GLDCP23378 1020 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 SDC4P31431 198 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 NRG1Q02297 640 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 SLC20A2Q08357 652 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 CNTN1Q12860 1018 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 WDR59Q6PJI9 974 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 LINGO4Q6UY18 593 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 STRADAQ7RTN6 431 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 IRF2BP2Q7Z5L9 587 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 RAB44Q7Z6P3 723 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 TMIEQ8NEW7 156 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 BAHD1Q8TBE0 780 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 RHBDD1Q8TEB9 315 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 ACE2Q9BYF1 805 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 TPX2Q9ULW0 747 aaKnown RBP18.3■□□□□ 0.52
CPNE1-210ENST00000416778 NEUROG3Q9Y4Z2 214 aa18.3■□□□□ 0.52
CPNE1-210ENST00000416778 ASPMQ8IZT6 3477 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 SPEGQ15772 3267 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 TCRBV5S1A1TA0A578 114 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 SIGLEC16A6NMB1 481 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 FAM72CH0Y354 149 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 RNF103O00237 685 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 TEX33O43247 280 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 PLRG1O43660 514 aaKnown RBP18.29■□□□□ 0.52
CPNE1-210ENST00000416778 BNIP3LO60238 219 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 PCDHGA12O60330 932 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 DFNA5O60443 496 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 RRM1P23921 792 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 CD38P28907 300 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 CHRNA3P32297 505 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 NSFP46459 744 aaKnown RBP18.29■□□□□ 0.52
CPNE1-210ENST00000416778 CLCN6P51797 869 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-210ENST00000416778 PRAMEF14Q5SWL7 426 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 FAM72AQ5TYM5 149 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 MANEALQ5VSG8 457 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 AGBL4Q5VU57 503 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 FAM72DQ6L9T8 149 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 ADAT2Q7Z6V5 191 aaKnown RBP18.29■□□□□ 0.52
CPNE1-210ENST00000416778 FAM72BQ86X60 149 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 PNPLA1Q8N8W4 532 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 DCAF4L2Q8NA75 395 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 KDF1Q8NAX2 398 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-210ENST00000416778 ADAMTS14Q8WXS8 1223 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 GATA6Q92908 595 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 RETREG1Q9H6L5 497 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 KLK13Q9UKR3 277 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 BTBD3Q9Y2F9 522 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 MSRB2Q9Y3D2 182 aa18.29■□□□□ 0.52
CPNE1-210ENST00000416778 C1QTNF3-AMACRE9PGA6 284 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 FLRT2O43155 660 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 CD160O95971 181 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 FTH1P19P0C7X4 201 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 HDAC4P56524 1084 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 C21orf59P57076 290 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 TAS2R38P59533 333 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 PPP2CBP62714 309 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 PPP2CAP67775 309 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 GNA12Q03113 381 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 CDO1Q16878 200 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 ARL13BQ3SXY8 428 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 POM121L1PQ3SYA9 428 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 UNQ6494/PRO21346Q6UXR6 183 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 PRPF39Q86UA1 669 aaKnown RBP18.28■□□□□ 0.52
CPNE1-210ENST00000416778 AOPEPQ8N6M6 819 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 CHST14Q8NCH0 376 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 SKA1Q96BD8 255 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 SERAC1Q96JX3 654 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 BPIFA3Q9BQP9 254 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
CPNE1-210ENST00000416778 NDFIP2Q9NV92 336 aa18.28■□□□□ 0.52
CPNE1-210ENST00000416778 FARP1Q9Y4F1 1045 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-210ENST00000416778 A0A1B0GTQ1 180 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 TLR4O00206 839 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 CBX4O00257 560 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 CALB1P05937 261 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 PLEKP08567 350 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-210ENST00000416778 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
CPNE1-210ENST00000416778 SHBQ15464 509 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 ANO6Q4KMQ2 910 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 ARSIQ5FYB1 569 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 PIP5KL1Q5T9C9 394 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 RETSATQ6NUM9 610 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 MON1BQ7L1V2 547 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 NLRP14Q86W24 1093 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 CCDC185Q8N715 623 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 C3orf20Q8ND61 904 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 FAM172AQ8WUF8 416 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 ARRDC3Q96B67 414 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 CDC6Q99741 560 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 SELENOOQ9BVL4 669 aa18.27■□□□□ 0.52
CPNE1-210ENST00000416778 NAT10Q9H0A0 1025 aaKnown RBP18.27■□□□□ 0.52
CPNE1-210ENST00000416778 AASDHPPTQ9NRN7 309 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms