RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
HDAC11-208ENST00000416248 FAM204AQ9H8W3 233 aa19.57■□□□□ 0.72
HDAC11-208ENST00000416248 METTL14Q9HCE5 456 aaKnown RBP19.57■□□□□ 0.72
HDAC11-208ENST00000416248 VPS28Q9UK41 221 aa19.57■□□□□ 0.72
HDAC11-208ENST00000416248 OR51B4Q9Y5P0 310 aa19.57■□□□□ 0.72
HDAC11-208ENST00000416248 NAV2Q8IVL1 2488 aa19.57■□□□□ 0.72
HDAC11-208ENST00000416248 TRIM49BA6NDI0 452 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 E5RJQ4 531 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 CCR1P32246 355 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 CLDN2P57739 230 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 PNOCQ13519 176 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 TMEM110Q86TL2 294 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 FAM174AQ8TBP5 190 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 IFI44Q8TCB0 444 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 RNF34Q969K3 372 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 DNAJC28Q9NX36 388 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 SATB2Q9UPW6 733 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 HS3ST2Q9Y278 367 aa19.56■□□□□ 0.72
HDAC11-208ENST00000416248 FARP1Q9Y4F1 1045 aaPredicted RBP19.56■□□□□ 0.72
HDAC11-208ENST00000416248 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 KPNA3O00505 521 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 NEBLO76041 1014 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 CHRNA3P32297 505 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 IRAK1P51617 712 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 SKOR1P84550 965 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 CETN1Q12798 172 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 ZNF177Q13360 481 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 AUHQ13825 339 aaKnown RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 TAF5Q15542 800 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 MEA1Q16626 185 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 ZNF542PQ5EBM4 170 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 C3orf38Q5JPI3 329 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 Q6ZSR6 202 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 DCP2Q8IU60 420 aaKnown RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 ARHGEF19Q8IW93 802 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 TMIEQ8NEW7 156 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 OR2A12Q8NGT7 310 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 ARRDC3Q96B67 414 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 GRAMD1AQ96CP6 724 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 MED8Q96G25 268 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 SLC46A1Q96NT5 459 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 TRPM6Q9BX84 2022 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 DDIT4Q9NX09 232 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 ZFR2Q9UPR6 939 aaKnown RBP19.55■□□□□ 0.72
HDAC11-208ENST00000416248 CNTN6Q9UQ52 1028 aa19.55■□□□□ 0.72
HDAC11-208ENST00000416248 A0A1W2PNU3 283 aaPredicted RBP19.54■□□□□ 0.72
HDAC11-208ENST00000416248 A6NNZ2 444 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 PYCARD-AS1I3L0S3 204 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 P4HA2O15460 535 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 SRCP12931 536 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 TGM2P21980 687 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 RBMS1P29558 406 aaKnown RBP19.54■□□□□ 0.72
HDAC11-208ENST00000416248 HNRNPKP61978 463 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC11-208ENST00000416248 CDK17Q00537 523 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 KCNC4Q03721 635 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 TMEM259Q4ZIN3 620 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 ZCCHC8Q6NZY4 707 aaKnown RBP19.54■□□□□ 0.72
HDAC11-208ENST00000416248 CCDC114Q96M63 670 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 GSDMAQ96QA5 445 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC11-208ENST00000416248 DYRK4Q9NR20 520 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 GPR27Q9NS67 375 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 VANGL2Q9ULK5 521 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 TBC1D30Q9Y2I9 924 aa19.54■□□□□ 0.72
HDAC11-208ENST00000416248 SYNJ2BP-COX16A0A087WUM0 186 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 K7ENP7 123 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 MED7O43513 233 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 CLDN11O75508 207 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 PCDH8O95206 1070 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 MT-CO1P00395 513 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 PRNPP04156 253 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 MTA1Q13330 715 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 SEL1L3Q68CR1 1132 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 OR6B2Q6IFH4 312 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 INO80CQ6PI98 192 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 ERN2Q76MJ5 926 aaKnown RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 PTAR1Q7Z6K3 402 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 ATP11CQ8NB49 1132 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 ZNF548Q8NEK5 533 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 CCDC97Q96F63 343 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 ATXN7L3BQ96GX2 97 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 KREMEN1Q96MU8 473 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 SLC2A13Q96QE2 648 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 SCAND2PQ9GZW5 306 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-208ENST00000416248 MUC3BQ9H195 1237 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 NCKIPSDQ9NZQ3 722 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 COX16Q9P0S2 106 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 HS3ST3A1Q9Y663 406 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 PIEZO2Q9H5I5 2752 aa19.53■□□□□ 0.72
HDAC11-208ENST00000416248 HECTD1Q9ULT8 2610 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 RNF103O00237 685 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 RIOK3O14730 519 aaKnown RBP19.52■□□□□ 0.72
HDAC11-208ENST00000416248 SLC28A2O43868 658 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 KRT5P13647 590 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 NME1P15531 152 aaKnown RBP19.52■□□□□ 0.72
HDAC11-208ENST00000416248 KRT83P78385 493 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 PDCLQ13371 301 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 FZD2Q14332 565 aa19.52■□□□□ 0.72
HDAC11-208ENST00000416248 CDKN3Q16667 212 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms