RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 EP300Q09472 2414 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-205ENST00000409810 GPR179Q6PRD1 2367 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 A0A0A6YYK5 440 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 IGHV1OR15-9A0A0B4J2B8 117 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 RASA4BC9J798 803 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 C1QTNF3-AMACRE9PGA6 284 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 DCLK1O15075 740 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 RASA4O43374 803 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 KDELR3O43731 214 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ZMPSTE24O75844 475 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 C7P10643 843 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 SRCP12931 536 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ERCC2P18074 760 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 CD6P30203 668 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 SERPINB6P35237 376 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 GJC1P36383 396 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ACVRL1P37023 503 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 TPMTP51580 245 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 CDH6P55285 790 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 RPS14P62263 151 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ARF5P84085 180 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 RPL6Q02878 288 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 PDK2Q15119 407 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ODF2Q5BJF6 829 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 FAM46CQ5VWP2 391 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 C22orf39Q6P5X5 142 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 MAP7D3Q8IWC1 876 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 UMODL1-AS1Q8N2C9 162 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 STK40Q8N2I9 435 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 FRS2Q8WU20 508 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 CASKIN2Q8WXE0 1202 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 DUSP15Q9H1R2 295 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ITM2CQ9NQX7 267 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 CWC15Q9P013 229 aaKnown RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 PCDHGA5Q9Y5G8 931 aa11.14□□□□□ -0.63
CHMP3-205ENST00000409810 ZFHX2Q9C0A1 2572 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-205ENST00000409810 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 BUB1O43683 1085 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 NRDCO43847 1150 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 BNIP3LO60238 219 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 LRP3O75074 770 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 EPN2O95208 641 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 IL1BP01584 269 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 TCF4P15884 667 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 C5AR1P21730 350 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 BCKDHBP21953 392 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 GLDCP23378 1020 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 PSMD8P48556 350 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 DHPSP49366 369 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 DPYSQ14117 519 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 CST6Q15828 149 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 LINGO4Q6UY18 593 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 Q6ZVU0 165 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 USP30Q70CQ3 517 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 KIAA1328Q86T90 577 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 KCTD6Q8NC69 237 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 GANCQ8TET4 914 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 FOXJ1Q92949 421 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 ISG20Q96AZ6 181 aaKnown RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 HMCESQ96FZ2 354 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 BTBD1Q9H0C5 482 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 PABPC3Q9H361 631 aaKnown RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 MTG2Q9H4K7 406 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 LRRC19Q9H756 370 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 SGK2Q9HBY8 427 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 PCDH18Q9HCL0 1135 aa11.13□□□□□ -0.63
CHMP3-205ENST00000409810 MBD1Q9UIS9 605 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-205ENST00000409810 ANKRD36A6QL64 1941 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 MCF2LO15068 1137 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 SPOPO43791 374 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 FOXD2O60548 495 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-205ENST00000409810 MT-CO1P00395 513 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 PRNPP04156 253 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 VAV1P15498 845 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-205ENST00000409810 SLC8A1P32418 973 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 VAV2P52735 878 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
CHMP3-205ENST00000409810 SNRPD1P62314 119 aaKnown RBP11.12□□□□□ -0.63
CHMP3-205ENST00000409810 CREB5Q02930 508 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 SERINC3Q13530 473 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 LYSMD4Q5XG99 296 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 CCDC112Q8NEF3 446 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 FAM71BQ8TC56 605 aa11.12□□□□□ -0.63
CHMP3-205ENST00000409810 TOE1Q96GM8 510 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms