RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LOC100506127A0A0U1RQW1 187 aa12.22□□□□□ -0.45
SMCR8-201ENST00000406438 FGF10O15520 208 aaPredicted RBP12.22□□□□□ -0.45
SMCR8-201ENST00000406438 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMCR8-201ENST00000406438 ATP1A4Q13733 1029 aa12.22□□□□□ -0.45
SMCR8-201ENST00000406438 UMODL1Q5DID0 1318 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 RPL3P39023 403 aaKnown RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 LIN54Q6MZP7 749 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 PDCD10Q9BUL8 212 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 NWD1Q149M9 1564 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 GPAT3Q53EU6 434 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 DNAJC14Q6Y2X3 702 aaPredicted RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 CXorf40AQ8TE69 158 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 PNMA5Q96PV4 448 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 C2orf49Q9BVC5 232 aaPredicted RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 TKTL2Q9H0I9 626 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 NEUROD4Q9HD90 331 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 MCM8Q9UJA3 840 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 ATP9AO75110 1047 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 MFN2O95140 757 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 MT-CO1P00395 513 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 ARHGDIBP52566 201 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 SLC27A1Q6PCB7 646 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 AADATQ8N5Z0 425 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 KLHL23Q8NBE8 558 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.45
SMCR8-201ENST00000406438 A0A096LPK6 155 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 IFNA16P05015 189 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 CRY1Q16526 586 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 PTPRHQ9HD43 1115 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 SMPD4Q9NXE4 827 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
SMCR8-201ENST00000406438 IQCMA0A1B0GVH7 501 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 MAGEC1O60732 1142 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 EPS8Q12929 822 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 DET1Q7L5Y6 550 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 CYP4X1Q8N118 509 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 TTLL2Q9BWV7 592 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 RSPH9Q9H1X1 276 aaPredicted RBP12.21□□□□□ -0.46
SMCR8-201ENST00000406438 CLOCKO15516 846 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 INSRRP14616 1297 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 ELK3P41970 407 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 PLK1P53350 603 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 ERVK-24P63145 666 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 MFSD10Q14728 455 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 PGM5Q15124 567 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 PFKFB4Q16877 469 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 ZSWIM2Q8NEG5 633 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 ADAM32Q8TC27 787 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 TBCBQ99426 244 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 CEP41Q9BYV8 373 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 CPA4Q9UI42 421 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 FAM50BQ9Y247 325 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.46
SMCR8-201ENST00000406438 RIPK2O43353 540 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 UBOX5O94941 541 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CCNIQ14094 377 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 BRSK2Q8IWQ3 736 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TMEM86AQ8N2M4 240 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 VAPBO95292 243 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 NTSR2O95665 410 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ME2P23368 584 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PDGFDQ9GZP0 370 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PRDM16Q9HAZ2 1276 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 A8MX80 341 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CTDNEP1O95476 244 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TPH1P17752 444 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 RPL9P32969 192 aaKnown RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 OXNAD1Q96HP4 312 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 VAT1Q99536 393 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 DSN1Q9H410 356 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TAF4O00268 1085 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ATP5C1P36542 298 aaKnown RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 RBBP4Q09028 425 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 SLC39A12Q504Y0 691 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PROSER1Q86XN7 944 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ZFP28Q8NHY6 868 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 FAIM2Q9BWQ8 316 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ATP13A3Q9H7F0 1226 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TMX2Q9Y320 296 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 RGL2O15211 777 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms