RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 DENND6AQ8IWF6 608 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 TMEM102Q8N9M5 508 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 VPS39Q96JC1 886 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 GBA2Q9HCG7 927 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 FBRSL1Q9HCM7 1045 aaKnown RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CHST12Q9NRB3 414 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 XPR1Q9UBH6 696 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 MYRFQ9Y2G1 1151 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 A0A087WZ62 844 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 RNF103-CHMP3A0A140T963 221 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PRORSD1PA6NEY8 169 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 KPNA7A9QM74 516 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 C9IYK1 514 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 MAFGO15525 162 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 H6PDO95479 791 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CCDC166P0CW27 439 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CD247P20963 164 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 NMBRP28336 390 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 AP3M2P53677 418 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 GJA9P57773 515 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 BNIP3Q12983 259 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 MPP3Q13368 585 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 ANO4Q32M45 955 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CANT1Q8WVQ1 401 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 NXNL1Q96CM4 212 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 FDXACB1Q9BRP7 624 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 FTHL17Q9BXU8 183 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 FRMD8Q9BZ67 464 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF696Q9H7X3 374 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 ACAD9Q9H845 621 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SPON1Q9HCB6 807 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SELENONQ9NZV5 590 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 BLOC1S6Q9UL45 172 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 VANGL2Q9ULK5 521 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SYNPO2Q9UMS6 1093 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 TCAF2A6NFQ2 919 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 SOCS2O14508 198 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 AP1G1O43747 822 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 COL6A2P12110 1019 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 TPSB2P20231 275 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 VARSP26640 1264 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 RXRGP48443 463 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 APOFQ13790 326 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 TPSAB1Q15661 275 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 FBXO48Q5FWF7 155 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 FSTL5Q8N475 847 aaPredicted RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 RP9Q8TA86 221 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 C12orf43Q96C57 262 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 DCPSQ96C86 337 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 CELF6Q96J87 481 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 CDHR1Q96JP9 859 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 RBBP8Q99708 897 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 OLAHQ9NV23 265 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 BARX2Q9UMQ3 279 aaPredicted RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 PTPRFP10586 1907 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 PSMD12O00232 456 aaPredicted RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 MAFO75444 373 aaPredicted RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 MYL4P12829 197 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 CES1P23141 567 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 EFNA5P52803 228 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 YBX1P67809 324 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 MPP1Q00013 466 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 KIZQ2M2Z5 673 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 SLC10A6Q3KNW5 377 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 FGD3Q5JSP0 725 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 TTC33Q6PID6 262 aaPredicted RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 PATL1Q86TB9 770 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 ACMSDQ8TDX5 336 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 DDI1Q8WTU0 396 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
SMC1B-202ENST00000404354 RTP4Q96DX8 246 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 FBXL20Q96IG2 436 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 TSNARE1Q96NA8 513 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 BCO2Q9BYV7 579 aa9.72□□□□□ -0.85
SMC1B-202ENST00000404354 PRSS51A0A1B0GVH4 220 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 B4GAT1O43505 415 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 GPC4O75487 556 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 FARP2O94887 1054 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ATE1O95260 518 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ARIH2O95376 493 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 LMO2P25791 158 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CNTFP26441 200 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 YWHAQP27348 245 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CXCR3P49682 368 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 POU6F1Q14863 301 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 SURF1Q15526 300 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CLEC6AQ6EIG7 209 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ILDR2Q71H61 639 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 KCNMB4Q86W47 210 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 RBM12BQ8IXT5 1001 aaKnown RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 PGAM4Q8N0Y7 254 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CBR4Q8N4T8 237 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF670Q9BS34 389 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms