RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NME5P56597 212 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 SNX16P57768 344 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 CDKL1Q00532 357 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 CCDC153Q494R4 210 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 PAN2Q504Q3 1202 aaKnown RBP12.19□□□□□ -0.46
RBM39-206ENST00000403542 NOMO2Q5JPE7 1267 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 PITRM1Q5JRX3 1037 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 SPANXN3Q5MJ09 141 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 UGT2A3Q6UWM9 527 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
RBM39-206ENST00000403542 GK5Q6ZS86 529 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 IPMKQ8NFU5 416 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 TMEM40Q8WWA1 233 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 XPR1Q9UBH6 696 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 AP4B1Q9Y6B7 739 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 ATP6AP2A0A1C7CYW4 349 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 C9IYK1 514 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 AURKAO14965 403 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 ATP6AP2O75787 350 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 CRTAMO95727 393 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 SETSIPP0DME0 302 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 PTPN1P18031 435 aaKnown RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 GJA9P57773 515 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 HNRNPDQ14103 355 aaKnown RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 DGKDQ16760 1214 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 SLC27A1Q6PCB7 646 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 FSTL5Q8N475 847 aaPredicted RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 JADE3Q92613 823 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 NXNL1Q96CM4 212 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 KLHL32Q96NJ5 620 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 WDR41Q9HAD4 459 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 TMEM30AQ9NV96 361 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 GMPR2Q9P2T1 348 aaKnown RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 DNAJB4Q9UDY4 337 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 SLC2A6Q9UGQ3 507 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 NUDT5Q9UKK9 219 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 HEMK1Q9Y5R4 338 aaPredicted RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 KCNU1A8MYU2 1149 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 HACD1B0YJ81 288 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 C9JVG2 144 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 MATN2O00339 956 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 CCL22O00626 93 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 FBXO21O94952 628 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 AP2A1O95782 977 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 CLPTM1O96005 669 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 SBK3P0C264 359 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 GABRB3P28472 473 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 RANBP1P43487 201 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 RPL14P50914 215 aaKnown RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 LAMC2Q13753 1193 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 STRADAQ7RTN6 431 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 NT5DC4Q86YG4 428 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 ZDHHC17Q8IUH5 632 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 GRIN3AQ8TCU5 1115 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 ATP6V1E2Q96A05 226 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 RTKNQ9BST9 563 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 NFKBIZQ9BYH8 718 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 OXSMQ9NWU1 459 aa12.18□□□□□ -0.46
RBM39-206ENST00000403542 MTF2Q9Y483 593 aaPredicted RBP12.18□□□□□ -0.46
RBM39-206ENST00000403542 DNAJC25-GNG10A0A024R161 153 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 HDAC3O15379 428 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 GRID2O43424 1007 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 AHSGP02765 367 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 THRAP10827 490 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 ADRA1BP35368 520 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 SEPT6Q14141 434 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 NADK2Q4G0N4 442 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 KIAA0319Q5VV43 1072 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 AMIGO2Q86SJ2 522 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
RBM39-206ENST00000403542 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 B4GALNT2Q8NHY0 566 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
RBM39-206ENST00000403542 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 RGSL1A5PLK6 1076 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 PMPCBO75439 489 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 SLC25A27O95847 323 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 FYNP06241 537 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 GLDCP23378 1020 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 GLUD2P49448 558 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 CDK18Q07002 472 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 PCSK7Q16549 785 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 PPP1R3AQ16821 1122 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 INSCQ1MX18 579 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 STXBP5Q5T5C0 1151 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms