RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SGCBQ16585 318 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 GPAT3Q53EU6 434 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ZMYM5Q9UJ78 669 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PSME2Q9UL46 239 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 OTOL1A6NHN0 477 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SRGNP10124 158 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 NFKB1P19838 968 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 GLUD2P49448 558 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TPD52L3Q96J77 140 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 MAT2AP31153 395 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ELK3P41970 407 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 HNMTP50135 292 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ITIH4Q14624 930 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PAGE2BQ5JRK9 111 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 METTL21CQ5VZV1 264 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RAP1GAP2Q684P5 730 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 CCDC115Q96NT0 180 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PANX3Q96QZ0 392 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC40A1Q9NP59 571 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM220BPB1ANY3 271 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 TSPAN1O60635 241 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 LTFP02788 710 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SELPP16109 830 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 GLRBP48167 497 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PTK7Q13308 1070 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SERPINB12Q96P63 405 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 C9J4A7 227 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC26A4O43511 780 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 MROH9Q5TGP6 573 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC35G2Q8TBE7 412 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RNFT2Q96EX2 444 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 OLFM3Q96PB7 478 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 CLEC3AO75596 197 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 MMP3P08254 477 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RPL4P36578 427 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 HPCAL1P37235 193 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 RIN1Q13671 783 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 NDUFA9Q16795 377 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 LGALS2P05162 132 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 ASGR1P07306 291 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PER3P56645 1201 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 NCF4Q15080 339 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 CAMK1DQ8IU85 385 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 TEX19Q8NA77 164 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SEC16BQ96JE7 1060 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 C5orf34Q96MH7 638 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC32A1Q9H598 525 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 TBC1D23Q9NUY8 699 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 CFAP97Q9P2B7 532 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 MRTO4Q9UKD2 239 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 AP4E1Q9UPM8 1137 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 PCDHB2Q9Y5E7 798 aa11.12□□□□□ -0.63
CACNA1C-216ENST00000399638 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RARGP13631 454 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 AGXTP21549 392 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 C8orf4Q9NR00 106 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 DRG1Q9Y295 367 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF609O15014 1411 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RGSL1A5PLK6 1076 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 H3BUI4 141 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ARP10275 920 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 TAL1P17542 331 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 C4BPBP20851 252 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 MPP2Q14168 576 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 LRRC32Q14392 662 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 APBB2Q92870 758 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 NKD1Q969G9 470 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 AGO4Q9HCK5 861 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ZFP14Q9HCL3 533 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF222Q9UK12 451 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 IRF6O14896 467 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 GYPCP04921 128 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ELFN1P0C7U0 828 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms