RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PCID2Q5JVF3 399 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PIWIL4Q7Z3Z4 852 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC41A1Q8IVJ1 513 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ARFGAP1Q8N6T3 406 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PIWIL1Q96J94 861 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 MARK4Q96L34 752 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 BTBD9Q96Q07 612 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TBL1YQ9BQ87 522 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TKTL2Q9H0I9 626 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 RHOJQ9H4E5 214 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 POMKQ9H5K3 350 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 XPR1Q9UBH6 696 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 COL1A2P08123 1366 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 IGKV6D-21A0A0A0MT36 114 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 A6NHS1 94 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 AP2A1O95782 977 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TOP3BO95985 862 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ADORA2AP29274 412 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PEX6Q13608 980 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 FSTL4Q6MZW2 842 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC22A9Q8IVM8 553 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CLEC4CQ8WTT0 213 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 GATA5Q9BWX5 397 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 DUSP16Q9BY84 665 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 OR12D3Q9UGF7 316 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CROTQ9UKG9 612 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 AP4B1Q9Y6B7 739 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 MRASO14807 208 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 MT-CO1P00395 513 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 USP17L7P0C7H9 530 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ADRA1BP35368 520 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TTC33Q6PID6 262 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 MYLK4Q86YV6 388 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ZSCAN18Q8TBC5 510 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 DNAJB3Q8WWF6 145 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 DCUN1D1Q96GG9 259 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TMEM79Q9BSE2 394 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 DPEP3Q9H4B8 488 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 VRTNQ9H8Y1 702 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 CCDC167Q9P0B6 97 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TIMM13Q9Y5L4 95 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ADM5C9JUS6 153 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 EDN1P05305 212 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 AQP4P55087 323 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 WSCD1Q658N2 575 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 MBLAC2Q68D91 279 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 CCDC117Q8IWD4 279 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 GIPC2Q8TF65 315 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 CYGBQ8WWM9 190 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 NXF3Q9H4D5 531 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 PKD2L2Q9NZM6 624 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 CLDN5O00501 218 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TRIM38O00635 465 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TNPO2O14787 897 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 GRIK3Q13003 919 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 FAM187BQ17R55 369 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 DSELQ8IZU8 1212 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 MFSD3Q96ES6 412 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 GORASP1Q9BQQ3 440 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC25A23Q9BV35 468 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 HACD3Q9P035 362 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF112Q9UJU3 913 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ODC1P11926 461 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ATP5F1P24539 256 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 SCNN1AP37088 669 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 AIF1P55008 147 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 RAB10P61026 200 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 PSME3P61289 254 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 SAMD4BQ5PRF9 694 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 NUP93Q8N1F7 819 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF786Q8N393 782 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC35F5Q8WV83 523 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 NDRG1Q92597 394 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF358Q9NW07 568 aa11.85□□□□□ -0.51
UBE2D3-209ENST00000394804 STK39Q9UEW8 545 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms