RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 COPAP53621 1224 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 TPI1P60174 286 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 GRM3Q14832 879 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SFT2D3Q587I9 215 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PSTKQ8IV42 348 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 APBB2Q92870 758 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PCED1BQ96HM7 432 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 TUBGCP5Q96RT8 1024 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 GATA5Q9BWX5 397 aaPredicted RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 NDE1Q9NXR1 346 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 IGSF9Q9P2J2 1179 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PPP1R12AO14974 1030 aaPredicted RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 MGEA5O60502 916 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 AP1G2O75843 785 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 AP2A1O95782 977 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 MT-CYBP00156 380 aaPredicted RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 POMCP01189 267 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 GABRB3P28472 473 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 TM4SF4P48230 202 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 HARS2P49590 506 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PGFP49763 221 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PSEN1P49768 467 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 LIMK2P53671 638 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 DNAL1Q4LDG9 190 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 CNTD1Q8N815 330 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PPFIBP2Q8ND30 876 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PPP4R1Q8TF05 950 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 HASPINQ8TF76 798 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 GATA6Q92908 595 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 F8W8V4 182 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 HSPA4LO95757 839 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 PEX2P28328 305 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 EPHA3P29320 983 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 DAOAP59103 153 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 KCTD11Q693B1 232 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 RNF148Q8N7C7 305 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 OR6Y1Q8NGX8 325 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 LENG8Q96PV6 779 aaPredicted RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 CPNE1Q99829 537 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 ECSITQ9BQ95 431 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 S100A14Q9HCY8 104 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 NUDT5Q9UKK9 219 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 SCNN1AP37088 669 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 MGAT3Q09327 533 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 MSLNQ13421 630 aaPredicted RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 RPS27LQ71UM5 84 aaKnown RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 BHLHA9Q7RTU4 235 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 TMEM135Q86UB9 458 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 DENND6AQ8IWF6 608 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 TSPAN18Q96SJ8 248 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 OMDQ99983 421 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 ATXN3LQ9H3M9 355 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
GTF2F1-201ENST00000394456 GABRDO14764 452 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 LRIG2O94898 1065 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 MAGEA12P43365 314 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 MPP1Q00013 466 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 CTBP1Q13363 440 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SPANXN3Q5MJ09 141 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 STXBP5Q5T5C0 1151 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 GRTP1Q5TC63 336 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 FAM35AQ86V20 835 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 KCTD4Q8WVF5 259 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 TKTL2Q9H0I9 626 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 CDH19Q9H159 772 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 CASS4Q9NQ75 786 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC38A7Q9NVC3 462 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 DNAJC28Q9NX36 388 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 RCOR3Q9P2K3 495 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC2A6Q9UGQ3 507 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 STAP1Q9ULZ2 295 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 POMPQ9Y244 141 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 INPP5FQ9Y2H2 1132 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 AIM2O14862 343 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 COX4I1P13073 169 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms