RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 VPS28Q9UK41 221 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 TNFSF13BQ9Y275 285 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SH3PXD2BA1X283 911 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 DPYSL4O14531 572 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MED26O95402 600 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MYL3P08590 195 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 ERVK-10P10266 1014 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 IDO1P14902 403 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 KCNA2P16389 499 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MSH3P20585 1137 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CYP2C18P33260 490 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 ETV4P43268 484 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 PTPN9P43378 593 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MPP1Q00013 466 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 TREML1Q86YW5 311 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 APOBEC3FQ8IUX4 373 aaKnown RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 P3H2Q8IVL5 708 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 EID3Q8N140 333 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 RNF148Q8N7C7 305 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SHCBP1Q8NEM2 672 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MCRS1Q96EZ8 462 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 POMKQ9H5K3 350 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SELENONQ9NZV5 590 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CCDC167Q9P0B6 97 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 E2F8A0AVK6 867 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CAPN14A8MX76 684 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 M0QYT0 321 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CYB561D2O14569 222 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 INPP4BO15327 924 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 AP1G1O43747 822 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 BMP10O95393 424 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 LBPP18428 481 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SCNN1AP37088 669 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 GLRBP48167 497 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 RXRGP48443 463 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 GDF10P55107 478 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 PURAQ00577 322 aaKnown RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CSTF3Q12996 717 aaKnown RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 TUBA3CQ13748 450 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 MBLAC2Q68D91 279 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 EPGNQ6UW88 154 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 LCLAT1Q6UWP7 414 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 METTL7BQ6UX53 244 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SLC30A10Q6XR72 485 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 FAM183BPQ6ZVS7 135 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 ZDHHC14Q8IZN3 488 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 ZSCAN18Q8TBC5 510 aaPredicted RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 PRICKLE1Q96MT3 831 aaPredicted RBP8.74□□□□□ -1.01
GABRA1-202ENST00000393943 EBF4Q9BQW3 602 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 CEP44Q9C0F1 390 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 SP110Q9HB58 689 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 DLEC1Q9Y238 1755 aa8.74□□□□□ -1.01
GABRA1-202ENST00000393943 COL22A1Q8NFW1 1626 aaPredicted RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 FAM95CA0A1B0GW59 222 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 DCAF8L1A6NGE4 600 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 SAGE2PA6NJ88 616 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CD3EAPO15446 510 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 ZMPSTE24O75844 475 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 LTA4HP09960 611 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 GM2AP17900 193 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 ACO1P21399 889 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 NFKBIAP25963 317 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 EPHA3P29320 983 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 TCF7P36402 384 aaPredicted RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 MAD2L1Q13257 205 aaPredicted RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 MOGQ16653 247 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 MTX3Q5HYI7 312 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CCNYL2Q5T2Q4 361 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 GPR107Q5VW38 600 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 NIPAL1Q6NVV3 410 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CYP2R1Q6VVX0 501 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 TTLL6Q8N841 843 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 IPMKQ8NFU5 416 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 OR7A2PQ8NGA2 310 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 NCSTNQ92542 709 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 PPP1R10Q96QC0 940 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 APOL4Q9BPW4 351 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 TUBA1CQ9BQE3 449 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 C12orf65Q9H3J6 166 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 SMPD3Q9NY59 655 aaPredicted RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 C3orf18Q9UK00 162 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CNTN6Q9UQ52 1028 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 FADS3Q9Y5Q0 445 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 DFFAO00273 331 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 ITM2AO43736 263 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 DLGAP3O95886 979 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 C2P06681 752 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CSH1P0DML2 217 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 CSH2P0DML3 217 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 TFEBP19484 476 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 RAP1GAPP47736 663 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 TAF6P49848 677 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 SLC25A11Q02978 314 aaKnown RBP8.73□□□□□ -1.01
GABRA1-202ENST00000393943 USP4Q13107 963 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 EFCAB12Q6NXP0 572 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
GABRA1-202ENST00000393943 PCDH20Q8N6Y1 951 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms