RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
CUL4A-203ENST00000375441 OR52B2Q96RD2 323 aa13.37□□□□□ -0.27
CUL4A-203ENST00000375441 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
CUL4A-203ENST00000375441 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
CUL4A-203ENST00000375441 SAC3D1A6NKF1 404 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PPEF2O14830 753 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 HCRTO43612 131 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 RNASEH1O60930 286 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 SUPT3HO75486 399 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CABYRO75952 493 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 LMO2P25791 158 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PRKAA2P54646 552 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CSE1LP55060 971 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 ZNF280AP59817 542 aaPredicted RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 IRF9Q00978 393 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 SLC10A2Q12908 348 aaPredicted RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 LSM12Q3MHD2 195 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 TIFABQ6ZNK6 161 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 DLG3Q92796 817 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CCDC138Q96M89 665 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 TKTL2Q9H0I9 626 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 NXF3Q9H4D5 531 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 SP110Q9HB58 689 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 AP4S1Q9Y587 144 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 ERI2A8K979 691 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 TSPAN1O60635 241 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 AMHP03971 560 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 NPR3P17342 541 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 GEMP55040 296 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PHEXP78562 749 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 GRM3Q14832 879 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 ADRM1Q16186 407 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 C9orf131Q5VYM1 1079 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 FAM156AQ8NDB6 213 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 ING2Q9H160 280 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 RBM22Q9NW64 420 aaKnown RBP eCLIP13.36□□□□□ -0.276e-7■■■■□ 20.6
CUL4A-203ENST00000375441 CNTN3Q9P232 1028 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 OR12D3Q9UGF7 316 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 V9GYQ6 96 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 GNGT2O14610 69 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 MRASO14807 208 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 RTN3O95197 1032 aaPredicted RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 C22orf31O95567 290 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PSME3P61289 254 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 C6orf52Q5T4I8 152 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 TMEM198Q66K66 360 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 FAR2Q96K12 515 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 MRGBPQ9NV56 204 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 ADRA1BP35368 520 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 RAB27AP51159 221 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 MAP3K10Q02779 954 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 CDK18Q07002 472 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PPIDQ08752 370 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PAN2Q504Q3 1202 aaKnown RBP13.36□□□□□ -0.27
CUL4A-203ENST00000375441 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 C9orf57Q5W0N0 161 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 LPCAT2Q7L5N7 544 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 SLC35F5Q8WV83 523 aa13.36□□□□□ -0.27
CUL4A-203ENST00000375441 COL24A1Q17RW2 1714 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 CAPN14A8MX76 684 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 ADM5C9JUS6 153 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 TMCC1O94876 653 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 FBXO21O94952 628 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 IL1BP01584 269 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 AMIGO2Q86SJ2 522 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 DNAJB3Q8WWF6 145 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 C20orf27Q9GZN8 174 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 MRPL46Q9H2W6 279 aaKnown RBP13.35□□□□□ -0.27
CUL4A-203ENST00000375441 CROTQ9UKG9 612 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 PABPN1LA6NDY0 278 aaKnown RBP13.35□□□□□ -0.27
CUL4A-203ENST00000375441 PSMD12O00232 456 aaPredicted RBP13.35□□□□□ -0.27
CUL4A-203ENST00000375441 NR5A2O00482 541 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 SNNO75324 88 aaPredicted RBP13.35□□□□□ -0.27
CUL4A-203ENST00000375441 BTBD9Q96Q07 612 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
CUL4A-203ENST00000375441 AP2A1O95782 977 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 LTFP02788 710 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 NDUFV1P49821 464 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 GATA6Q92908 595 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 CCDC126Q96EE4 140 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 VAT1Q99536 393 aa13.35□□□□□ -0.27
CUL4A-203ENST00000375441 PRDM16Q9HAZ2 1276 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms