RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SREK1Q8WXA9 508 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SPATA16Q9BXB7 569 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 WDR55Q9H6Y2 383 aaPredicted RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 CPSF2Q9P2I0 782 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 PRPF19Q9UMS4 504 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 ANKRD6Q9Y2G4 727 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 RGSL1A5PLK6 1076 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 TK2O00142 265 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SLC22A2O15244 555 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 HDAC3O15379 428 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 GRID2O43424 1007 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 FBXO21O94952 628 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 FAM163BP0C2L3 166 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 THRAP10827 490 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 NMBRP28336 390 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 LRPAP1P30533 357 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SERPINB6P35237 376 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SERPINB5P36952 375 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 RPL14P50914 215 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 TTLL12Q14166 644 aaPredicted RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SNX17Q15036 470 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 TRIP10Q15642 601 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 ANO4Q32M45 955 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 LSM12Q3MHD2 195 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 LIN52Q52LA3 116 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 RAB41Q5JT25 222 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 SMG8Q8ND04 991 aaKnown RBP12.98□□□□□ -0.33
CTPS1-202ENST00000372621 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 VAT1Q99536 393 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 KIFC1Q9BW19 673 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 CRTAC1Q9NQ79 661 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
CTPS1-202ENST00000372621 AP1G1O43747 822 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 YY1P25490 414 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 CALRP27797 417 aaKnown RBP12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GRIA4P48058 902 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 RABGGTBP53611 331 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 ADAM17P78536 824 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 NSUN2Q08J23 767 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTPS1-202ENST00000372621 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 FBXL19Q6PCT2 694 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GPRIN1Q7Z2K8 1008 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 ARHGAP18Q8N392 663 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 AGR3Q8TD06 166 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 BTBD9Q96Q07 612 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 APOL2Q9BQE5 337 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 TMEM30AQ9NV96 361 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 MID2Q9UJV3 735 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GOLGA8QA0A0J9YX86 632 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GOLGA8OA6NCC3 632 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GOLGA8NF8WBI6 632 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 STRNO43815 780 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 CACNG3O60359 315 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 SLC35E2BP0CK96 405 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 TPH1P17752 444 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GABRB3P28472 473 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 GRIA2P42262 883 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 CCR10P46092 362 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 POLE2P56282 527 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 ARL13AQ5H913 290 aaPredicted RBP12.97□□□□□ -0.33
CTPS1-202ENST00000372621 UGT2A3Q6UWM9 527 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 LCA5Q86VQ0 697 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 LSMEM2Q8N112 164 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 RP9Q8TA86 221 aaKnown RBP12.97□□□□□ -0.33
CTPS1-202ENST00000372621 SMOQ99835 787 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 SLC39A10Q9ULF5 831 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 IPPQ9Y573 584 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 MYLKQ15746 1914 aa12.97□□□□□ -0.33
CTPS1-202ENST00000372621 PTGESO14684 152 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 CABYRO75952 493 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 F2P00734 622 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 FAM200BP0CF97 657 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 TFEBP19484 476 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 EPHA3P29320 983 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 PRKAA2P54646 552 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 SEL1L3Q68CR1 1132 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 DSELQ8IZU8 1212 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 STYXQ8WUJ0 223 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 RHOJQ9H4E5 214 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-202ENST00000372621 ZDHHC2Q9UIJ5 367 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 PSMD13Q9UNM6 376 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 GOLGA8TH3BQL2 631 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 NUDT2P50583 147 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 INHBEP58166 350 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 CDH17Q12864 832 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 ZNF423Q2M1K9 1284 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 PIGGQ5H8A4 983 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 C16orf89Q6UX73 402 aa12.96□□□□□ -0.33
CTPS1-202ENST00000372621 SNX32Q86XE0 403 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms